Project measure / variable:   Threadgill1   age

ID, description, units MPD:19498   age   age at testing (local parameter)   [wks]  
Data set, strains Threadgill1   inbred w/CC7   37 strains     sex: m
Procedure colony observation
Ontology mappings


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  STRAIN COMPARISON PLOT
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Threadgill1 - age at testing (local parameter)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested37 strains
Mean of the strain means8.67   wks
Median of the strain means8.56   wks
SD of the strain means± 0.525
Coefficient of variation (CV)0.0606
Min–max range of strain means8.00   –   10.0   wks
Mean sample size per strain16.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 36 182.9121 5.0809 2.328 < 0.0001
Residuals 581 1268.0669 2.1826


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 8.36 0.497   14 0.133 0.0595 8.0, 9.0 -0.6
A/J m 8.92 0.669   12 0.193 0.075 8.0, 10.0 0.47
AKR/J m 8.56 1.28   27 0.247 0.15 8.0, 12.0 -0.22
B6C3F1/J m 9.62 2.16   26 0.423 0.224 8.0, 16.0 1.8
BALB/cByJ m 8.0 0.0   12 0.0 0.0 8.0, 8.0 -1.28
BTBR T+ Itpr3tf/J m 8.33 0.651   12 0.188 0.0782 7.0, 9.0 -0.65
BUB/BnJ m 8.25 0.452   12 0.131 0.0548 8.0, 9.0 -0.81
C3H/HeJ m 9.27 2.88   26 0.564 0.311 8.0, 17.0 1.14
C57BL/10J m 8.0 0.0   24 0.0 0.0 8.0, 8.0 -1.28
C57BL/6J m 8.25 0.452   12 0.131 0.0548 8.0, 9.0 -0.81
C57BLKS/J m 8.6 0.507   15 0.131 0.059 8.0, 9.0 -0.14
C57BR/cdJ m 8.25 0.452   12 0.131 0.0548 8.0, 9.0 -0.81
C57L/J m 8.0 0.0   12 0.0 0.0 8.0, 8.0 -1.28
CAST/EiJ m 9.07 0.961   29 0.178 0.106 8.0, 10.0 0.75
CBA/J m 9.73 3.62   26 0.709 0.372 8.0, 17.0 2.01
CZECHII/EiJ m 8.42 0.515   12 0.149 0.0612 8.0, 9.0 -0.48
DBA/2J m 8.94 1.31   31 0.236 0.147 7.0, 12.0 0.51
FVB/NJ m 9.5 2.28   18 0.538 0.24 7.0, 13.0 1.57
JF1/MsJ m 8.42 0.793   12 0.229 0.0942 8.0, 10.0 -0.48
KK/HlJ m 9.4 1.92   15 0.496 0.204 8.0, 13.0 1.38
LP/J m 9.42 1.7   33 0.295 0.18 8.0, 12.0 1.42
MA/MyJ m 8.5 0.905   12 0.261 0.106 8.0, 10.0 -0.33
MSM/MsJ m 8.5 0.522   12 0.151 0.0614 8.0, 9.0 -0.33
NOD/ShiLtJ m 8.62 0.495   24 0.101 0.0573 8.0, 9.0 -0.1
NON/ShiLtJ m 9.0 1.04   12 0.302 0.116 8.0, 10.0 0.62
NZO/HlLtJ m 8.77 0.832   13 0.231 0.0949 8.0, 10.0 0.18
NZW/LacJ m 8.73 1.1   15 0.284 0.126 7.0, 12.0 0.11
PERA/EiJ m 8.5 0.905   12 0.261 0.106 8.0, 10.0 -0.33
P/J m 8.75 0.452   12 0.131 0.0517 8.0, 9.0 0.15
PL/J m 8.58 0.793   12 0.229 0.0924 8.0, 10.0 -0.18
PWD/PhJ m 8.0 0.0   12 0.0 0.0 8.0, 8.0 -1.28
RIIIS/J m 8.75 0.452   12 0.131 0.0517 8.0, 9.0 0.15
SEA/GnJ m 8.25 0.452   12 0.131 0.0548 8.0, 9.0 -0.81
SJL/J m 8.2 0.414   15 0.107 0.0505 8.0, 9.0 -0.9
SM/J m 8.21 0.721   24 0.147 0.0878 7.0, 10.0 -0.88
SWR/J m 10.0 3.14   15 0.811 0.314 8.0, 16.0 2.53
WSB/EiJ m 8.25 0.452   12 0.131 0.0548 8.0, 9.0 -0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 8.3571 0.3948 9.1326 7.5817
A/J m 8.9167 0.4265 9.7543 8.079
AKR/J m 8.5556 0.2843 9.114 7.9971
B6C3F1/J m 9.6154 0.2897 10.1844 9.0463
BALB/cByJ m 8.0 0.4265 8.8376 7.1624
BTBR T+ Itpr3tf/J m 8.3333 0.4265 9.171 7.4957
BUB/BnJ m 8.25 0.4265 9.0876 7.4124
C3H/HeJ m 9.2692 0.2897 9.8383 8.7002
C57BL/10J m 8.0 0.3016 8.5923 7.4077
C57BL/6J m 8.25 0.4265 9.0876 7.4124
C57BLKS/J m 8.6 0.3814 9.3492 7.8508
C57BR/cdJ m 8.25 0.4265 9.0876 7.4124
C57L/J m 8.0 0.4265 8.8376 7.1624
CAST/EiJ m 9.069 0.2743 9.6078 8.5302
CBA/J m 9.7308 0.2897 10.2998 9.1617
CZECHII/EiJ m 8.4167 0.4265 9.2543 7.579
DBA/2J m 8.9355 0.2653 9.4566 8.4143
FVB/NJ m 9.5 0.3482 10.1839 8.8161
JF1/MsJ m 8.4167 0.4265 9.2543 7.579
KK/HlJ m 9.4 0.3814 10.1492 8.6508
LP/J m 9.4242 0.2572 9.9293 8.9191
MA/MyJ m 8.5 0.4265 9.3376 7.6624
MSM/MsJ m 8.5 0.4265 9.3376 7.6624
NOD/ShiLtJ m 8.625 0.3016 9.2173 8.0327
NON/ShiLtJ m 9.0 0.4265 9.8376 8.1624
NZO/HlLtJ m 8.7692 0.4097 9.574 7.9645
NZW/LacJ m 8.7333 0.3814 9.4825 7.9841
PERA/EiJ m 8.5 0.4265 9.3376 7.6624
P/J m 8.75 0.4265 9.5876 7.9124
PL/J m 8.5833 0.4265 9.421 7.7457
PWD/PhJ m 8.0 0.4265 8.8376 7.1624
RIIIS/J m 8.75 0.4265 9.5876 7.9124
SEA/GnJ m 8.25 0.4265 9.0876 7.4124
SJL/J m 8.2 0.3814 8.9492 7.4508
SM/J m 8.2083 0.3016 8.8006 7.616
SWR/J m 10.0 0.3814 10.7492 9.2508
WSB/EiJ m 8.25 0.4265 9.0876 7.4124




  GWAS USING LINEAR MIXED MODELS