Project measure / variable:   Threadgill1   catalase_ctrl

ID, description, units MPD:19482   catalase_ctrl   catalase   [µg/mL]  control  
acetaminophen study
Data set, strains Threadgill1   inbred w/CC7   37 strains     sex: m     age: 8-12wks
Procedure metabolic panel
Ontology mappings

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  STRAIN COMPARISON PLOT
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Threadgill1 - catalase control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested37 strains
Mean of the strain means485   µg/mL
Median of the strain means457   µg/mL
SD of the strain means± 147
Coefficient of variation (CV)0.303
Min–max range of strain means216   –   770   µg/mL
Mean sample size per strain2.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 1300667.5901 39414.1694 1.0907 0.3946
Residuals 39 1409333.68 36136.761


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 610.0 158.0   2   112.0 0.26 498.0, 722.0 0.85
A/J m 394.0 112.0   2   79.5 0.285 315.0, 474.0 -0.62
AKR/J m 418.0 204.0   2   144.0 0.487 274.0, 562.0 -0.46
B6C3F1/J m 536.0 173.0   2   122.0 0.322 414.0, 658.0 0.34
BALB/cByJ m 627.0 97.6   2   69.0 0.156 558.0, 696.0 0.96
BTBR T+ Itpr3tf/J m 446.0 175.0   2   123.0 0.391 323.0, 570.0 -0.27
BUB/BnJ m 364.0 23.5   3 13.6 0.0646 340.0, 387.0 -0.83
C3H/HeJ m 743.0 49.5   2   35.0 0.0666 708.0, 778.0 1.75
C57BL/10J m 370.0 63.6   2   45.0 0.172 325.0, 415.0 -0.78
C57BL/6J m 652.0 351.0   2   248.0 0.538 404.0, 900.0 1.13
C57BLKS/J m 256.0 124.0   2   87.5 0.484 168.0, 343.0 -1.56
C57BR/cdJ m 298.0 113.0   2   80.0 0.38 218.0, 378.0 -1.27
C57L/J m 323.0 83.4   2   59.0 0.258 264.0, 382.0 -1.1
CAST/EiJ m 216.0 0.0   1   0.0 0.0 216.0, 216.0 -1.83
CBA/J m 432.0 191.0   2   135.0 0.442 297.0, 567.0 -0.36
CZECHII/EiJ m 479.0 190.0   3 110.0 0.397 320.0, 690.0 -0.04
DBA/2J m 711.0 126.0   2   89.0 0.177 622.0, 800.0 1.54
FVB/NJ m 280.0 0.0   1   0.0 0.0 280.0, 280.0 -1.4
JF1/MsJ m 770.0 272.0   2   192.0 0.353 578.0, 963.0 1.94
KK/HlJ m 438.0 125.0   2   88.5 0.285 350.0, 527.0 -0.32
LP/J m 457.0 254.0   3 146.0 0.555 207.0, 714.0 -0.19
MA/MyJ m 592.0 187.0   2   132.0 0.316 460.0, 725.0 0.73
MSM/MsJ m 590.0 359.0   2   254.0 0.609 336.0, 844.0 0.71
NOD/ShiLtJ m 454.0 272.0   2   192.0 0.598 262.0, 646.0 -0.21
NON/ShiLtJ m 284.0 107.0   2   76.0 0.378 208.0, 360.0 -1.37
NZO/HlLtJ m 508.0 260.0   2   183.0 0.511 324.0, 691.0 0.15
NZW/LacJ m 429.0 25.5   2   18.0 0.0593 411.0, 447.0 -0.38
PERA/EiJ m 631.0 262.0   3 151.0 0.415 358.0, 880.0 0.99
P/J m 520.0 31.8   2   22.5 0.0611 498.0, 543.0 0.24
PL/J m 400.0 65.1   2   46.0 0.163 354.0, 446.0 -0.58
PWD/PhJ m 359.0 425.0   2   300.0 1.18 58.4, 659.0 -0.86
RIIIS/J m 700.0 0.0   1   0.0 0.0 700.0, 700.0 1.46
SEA/GnJ m 610.0 64.3   2   45.5 0.106 564.0, 655.0 0.85
SJL/J m 596.0 134.0   2   95.0 0.225 501.0, 691.0 0.75
SM/J m 612.0 199.0   2   140.0 0.325 471.0, 752.0 0.86
SWR/J m 311.0 53.3   3 30.8 0.171 276.0, 372.0 -1.19
WSB/EiJ m 540.0 210.0   2   148.0 0.389 392.0, 689.0 0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 610.0 134.4187 881.8874 338.1126
A/J m 394.5 134.4187 666.3874 122.6126
AKR/J m 418.0 134.4187 689.8874 146.1126
B6C3F1/J m 536.0 134.4187 807.8874 264.1126
BALB/cByJ m 627.0 134.4187 898.8874 355.1126
BTBR T+ Itpr3tf/J m 446.5 134.4187 718.3874 174.6126
BUB/BnJ m 364.3333 109.7524 586.3285 142.3382
C3H/HeJ m 743.0 134.4187 1014.8874 471.1126
C57BL/10J m 370.0 134.4187 641.8874 98.1126
C57BL/6J m 652.0 134.4187 923.8874 380.1126
C57BLKS/J m 255.5 134.4187 527.3874 0.0
C57BR/cdJ m 298.0 134.4187 569.8874 26.1126
C57L/J m 323.0 134.4187 594.8874 51.1126
CBA/J m 432.0 134.4187 703.8874 160.1126
CZECHII/EiJ m 479.3333 109.7524 701.3285 257.3382
DBA/2J m 711.0 134.4187 982.8874 439.1126
JF1/MsJ m 770.5 134.4187 1042.3874 498.6126
KK/HlJ m 438.5 134.4187 710.3874 166.6126
LP/J m 457.0 109.7524 678.9952 235.0048
MA/MyJ m 592.5 134.4187 864.3874 320.6126
MSM/MsJ m 590.0 134.4187 861.8874 318.1126
NOD/ShiLtJ m 454.0 134.4187 725.8874 182.1126
NON/ShiLtJ m 284.0 134.4187 555.8874 12.1126
NZO/HlLtJ m 507.5 134.4187 779.3874 235.6126
NZW/LacJ m 429.0 134.4187 700.8874 157.1126
PERA/EiJ m 631.0 109.7524 852.9952 409.0048
P/J m 520.5 134.4187 792.3874 248.6126
PL/J m 400.0 134.4187 671.8874 128.1126
PWD/PhJ m 358.7 134.4187 630.5874 86.8126
SEA/GnJ m 609.5 134.4187 881.3874 337.6126
SJL/J m 596.0 134.4187 867.8874 324.1126
SM/J m 611.5 134.4187 883.3874 339.6126
SWR/J m 310.6667 109.7524 532.6618 88.6715
WSB/EiJ m 540.5 134.4187 812.3874 268.6126




  GWAS USING LINEAR MIXED MODELS