Project measure / variable:   Taft1   pct_dead_IVF


  STRAIN COMPARISON PLOT
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Taft1 - dead embryos, percentage of IVF dish cells



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested10 strains
Mean of the strain means0.398   %
Median of the strain means0.209   %
SD of the strain means± 0.520
Coefficient of variation (CV)1.31
Min–max range of strain means0   –   1.50   %
Mean sample size per strain16.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 9 42.601 4.7334 2.5247 0.0099
Residuals 158 296.2323 1.8749


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.25 0.577   16 0.144 2.31 -0.28
A/J f 0.0 0.0   12 0.0 0.0 -0.77
BALB/cByJ f 0.955 1.84   22 0.392 1.93 1.07
BALB/cJ f 0.167 0.707   18 0.167 4.24 -0.44
C3H/HeJ f 0.0 0.0   18 0.0 0.0 -0.77
C57BL/6J f 0.0 0.0   16 0.0 0.0 -0.77
DBA/2J f 0.833 1.8   12 0.52 2.16 0.84
FVB/NJ f 0.0 0.0   18 0.0 0.0 -0.77
NOD/ShiLtJ f 1.5 3.11   18 0.733 2.07 2.12
SJL/J f 0.278 0.826   18 0.195 2.98 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.25 0.3423 0.9261 -0.4261
A/J f 0.0 0.3953 0.7807 -0.7807
BALB/cByJ f 0.9545 0.2919 1.5311 0.378
BALB/cJ f 0.1667 0.3227 0.8041 -0.4708
C3H/HeJ f 0.0 0.3227 0.6374 -0.6374
C57BL/6J f 0.0 0.3423 0.6761 -0.6761
DBA/2J f 0.8333 0.3953 1.614 0.0526
FVB/NJ f 0.0 0.3227 0.6374 -0.6374
NOD/ShiLtJ f 1.5 0.3227 2.1374 0.8626
SJL/J f 0.2778 0.3227 0.9152 -0.3597




  GWAS USING LINEAR MIXED MODELS