Project measure / variable:   Lake3   accel3

ID, description, units MPD:19023   accel3   latency to fall from accelerating rotarod, 60 rpm/min   [s]  trial3  
Data set, strains Lake3   B6.A consomic w/par   23 strains     sex: both     age: 8-9wks
Procedure rotarod
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  STRAIN COMPARISON PLOT
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Lake3 - latency to fall from accelerating rotarod, 60 rpm/min trial3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means15.7   s 13.8   s
Median of the strain means15.6   s 14.4   s
SD of the strain means± 3.37 ± 2.84
Coefficient of variation (CV)0.215 0.205
Min–max range of strain means6.12   –   20.0   s 4.12   –   18.1   s
Mean sample size per strain8.4   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 248.5128 248.5128 7.7814 0.0056
strain 22 3832.9781 174.2263 5.4554 < 0.0001
sex:strain 22 412.2578 18.739 0.5868 0.932
Residuals 336 10730.6911 31.9366


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 6.12 4.91   16 1.23 0.802 -2.84
A/J m 4.12 3.0   8 1.06 0.727 -3.43
B6.A-Chr1 f 14.5 8.19   8 2.9 0.565 2.0, 26.0 -0.36
B6.A-Chr1 m 13.9 5.03   8 1.78 0.362 5.0, 19.0 0.02
B6.A-Chr10 f 12.4 4.81   8 1.7 0.389 6.0, 20.0 -0.98
B6.A-Chr10 m 12.0 3.63   8 1.28 0.302 8.0, 18.0 -0.65
B6.A-Chr11 f 12.5 5.88   8 2.08 0.47 3.0, 20.0 -0.95
B6.A-Chr11 m 12.6 3.37   10 1.07 0.268 8.0, 18.0 -0.44
B6.A-Chr12 f 14.1 5.89   8 2.08 0.417 4.0, 22.0 -0.47
B6.A-Chr12 m 15.0 4.31   8 1.52 0.287 9.0, 24.0 0.41
B6.A-Chr13 f 17.2 3.27   5 1.46 0.19 12.0, 21.0 0.44
B6.A-Chr13 m 12.3 5.09   7 1.92 0.414 4.0, 18.0 -0.55
B6.A-Chr14 f 19.9 5.67   8 2.0 0.285 12.0, 27.0 1.25
B6.A-Chr14 m 16.6 5.24   8 1.85 0.315 11.0, 26.0 0.97
B6.A-Chr15 f 13.2 6.27   8 2.22 0.473 5.0, 22.0 -0.74
B6.A-Chr15 m 14.4 2.39   8 0.844 0.166 10.0, 17.0 0.19
B6.A-Chr16 f 15.6 5.76   8 2.03 0.368 7.0, 25.0 -0.03
B6.A-Chr16 m 11.8 5.47   8 1.93 0.466 2.0, 21.0 -0.72
B6.A-Chr17 f 16.6 6.3   8 2.23 0.379 8.0, 26.0 0.27
B6.A-Chr17 m 14.5 1.69   8 0.598 0.117 12.0, 16.0 0.23
B6.A-Chr18 f 18.0 6.59   8 2.33 0.366 8.0, 24.0 0.68
B6.A-Chr18 m 14.5 7.46   8 2.64 0.515 3.0, 22.0 0.23
B6.A-Chr19 f 17.1 9.16   8 3.24 0.535 5.0, 29.0 0.41
B6.A-Chr19 m 18.1 4.73   8 1.67 0.261 10.0, 25.0 1.5
B6.A-Chr2 f 19.8 3.96   8 1.4 0.2 15.0, 26.0 1.22
B6.A-Chr2 m 13.6 3.93   8 1.39 0.288 9.0, 19.0 -0.09
B6.A-Chr3 f 13.2 6.04   8 2.14 0.456 6.0, 24.0 -0.74
B6.A-Chr3 m 14.4 2.97   8 1.05 0.207 9.0, 18.0 0.19
B6.A-Chr4 f 18.9 5.64   8 1.99 0.299 11.0, 28.0 0.95
B6.A-Chr4 m 14.6 5.13   8 1.81 0.35 6.0, 20.0 0.26
B6.A-Chr5 f 19.2 8.1   8 2.86 0.421 6.0, 30.0 1.04
B6.A-Chr5 m 15.9 7.06   8 2.5 0.445 7.0, 29.0 0.72
B6.A-Chr6 f 11.9 3.09   8 1.09 0.26 8.0, 18.0 -1.13
B6.A-Chr6 m 10.6 5.24   8 1.85 0.493 2.0, 16.0 -1.14
B6.A-Chr7 f 14.5 6.35   8 2.24 0.438 6.0, 23.0 -0.36
B6.A-Chr7 m 13.0 4.72   8 1.67 0.363 7.0, 21.0 -0.3
B6.A-Chr8 f 15.6 11.1   8 3.93 0.712 1.0, 30.0 -0.03
B6.A-Chr8 m 15.8 6.43   8 2.27 0.408 5.0, 23.0 0.69
B6.A-Chr9 f 20.0 4.9   8 1.73 0.245 14.0, 27.0 1.27
B6.A-Chr9 m 18.0 7.21   8 2.55 0.401 7.0, 29.0 1.46
B6.A-ChrX f 17.0 4.84   8 1.71 0.285 6.0, 21.0 0.39
B6.A-ChrX m 12.6 5.15   8 1.82 0.408 5.0, 18.0 -0.44
B6.A-ChrY f 14.2 4.95   8 1.75 0.347 6.0, 21.0 -0.45
B6.A-ChrY m 14.4 5.48   8 1.94 0.381 3.0, 22.0 0.19
C57BL/6J f 19.6 6.57   16 1.64 0.336 6.0, 28.0 1.16
C57BL/6J m 15.8 3.11   8 1.1 0.197 11.0, 20.0 0.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 6.125 1.4128 8.9041 3.3459
A/J m 4.125 1.998 8.0552 0.1948
B6.A-Chr1 f 14.5 1.998 18.4302 10.5698
B6.A-Chr1 m 13.875 1.998 17.8052 9.9448
B6.A-Chr10 f 12.375 1.998 16.3052 8.4448
B6.A-Chr10 m 12.0 1.998 15.9302 8.0698
B6.A-Chr11 f 12.5 1.998 16.4302 8.5698
B6.A-Chr11 m 12.6 1.7871 16.1153 9.0847
B6.A-Chr12 f 14.125 1.998 18.0552 10.1948
B6.A-Chr12 m 15.0 1.998 18.9302 11.0698
B6.A-Chr13 f 17.2 2.5273 22.1714 12.2286
B6.A-Chr13 m 12.2857 2.136 16.4873 8.0842
B6.A-Chr14 f 19.875 1.998 23.8052 15.9448
B6.A-Chr14 m 16.625 1.998 20.5552 12.6948
B6.A-Chr15 f 13.25 1.998 17.1802 9.3198
B6.A-Chr15 m 14.375 1.998 18.3052 10.4448
B6.A-Chr16 f 15.625 1.998 19.5552 11.6948
B6.A-Chr16 m 11.75 1.998 15.6802 7.8198
B6.A-Chr17 f 16.625 1.998 20.5552 12.6948
B6.A-Chr17 m 14.5 1.998 18.4302 10.5698
B6.A-Chr18 f 18.0 1.998 21.9302 14.0698
B6.A-Chr18 m 14.5 1.998 18.4302 10.5698
B6.A-Chr19 f 17.125 1.998 21.0552 13.1948
B6.A-Chr19 m 18.125 1.998 22.0552 14.1948
B6.A-Chr2 f 19.75 1.998 23.6802 15.8198
B6.A-Chr2 m 13.625 1.998 17.5552 9.6948
B6.A-Chr3 f 13.25 1.998 17.1802 9.3198
B6.A-Chr3 m 14.375 1.998 18.3052 10.4448
B6.A-Chr4 f 18.875 1.998 22.8052 14.9448
B6.A-Chr4 m 14.625 1.998 18.5552 10.6948
B6.A-Chr5 f 19.25 1.998 23.1802 15.3198
B6.A-Chr5 m 15.875 1.998 19.8052 11.9448
B6.A-Chr6 f 11.875 1.998 15.8052 7.9448
B6.A-Chr6 m 10.625 1.998 14.5552 6.6948
B6.A-Chr7 f 14.5 1.998 18.4302 10.5698
B6.A-Chr7 m 13.0 1.998 16.9302 9.0698
B6.A-Chr8 f 15.625 1.998 19.5552 11.6948
B6.A-Chr8 m 15.75 1.998 19.6802 11.8198
B6.A-Chr9 f 20.0 1.998 23.9302 16.0698
B6.A-Chr9 m 18.0 1.998 21.9302 14.0698
B6.A-ChrX f 17.0 1.998 20.9302 13.0698
B6.A-ChrX m 12.625 1.998 16.5552 8.6948
B6.A-ChrY f 14.25 1.998 18.1802 10.3198
B6.A-ChrY m 14.375 1.998 18.3052 10.4448
C57BL/6J f 19.5625 1.4128 22.3416 16.7834
C57BL/6J m 15.75 1.998 19.6802 11.8198


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 5.125 1.2235 7.5317 2.7183
B6.A-Chr1 both 14.1875 1.4128 16.9666 11.4084
B6.A-Chr10 both 12.1875 1.4128 14.9666 9.4084
B6.A-Chr11 both 12.55 1.3403 15.1865 9.9135
B6.A-Chr12 both 14.5625 1.4128 17.3416 11.7834
B6.A-Chr13 both 14.7429 1.6545 17.9974 11.4883
B6.A-Chr14 both 18.25 1.4128 21.0291 15.4709
B6.A-Chr15 both 13.8125 1.4128 16.5916 11.0334
B6.A-Chr16 both 13.6875 1.4128 16.4666 10.9084
B6.A-Chr17 both 15.5625 1.4128 18.3416 12.7834
B6.A-Chr18 both 16.25 1.4128 19.0291 13.4709
B6.A-Chr19 both 17.625 1.4128 20.4041 14.8459
B6.A-Chr2 both 16.6875 1.4128 19.4666 13.9084
B6.A-Chr3 both 13.8125 1.4128 16.5916 11.0334
B6.A-Chr4 both 16.75 1.4128 19.5291 13.9709
B6.A-Chr5 both 17.5625 1.4128 20.3416 14.7834
B6.A-Chr6 both 11.25 1.4128 14.0291 8.4709
B6.A-Chr7 both 13.75 1.4128 16.5291 10.9709
B6.A-Chr8 both 15.6875 1.4128 18.4666 12.9084
B6.A-Chr9 both 19.0 1.4128 21.7791 16.2209
B6.A-ChrX both 14.8125 1.4128 17.5916 12.0334
B6.A-ChrY both 14.3125 1.4128 17.0916 11.5334
C57BL/6J both 17.6563 1.2235 20.063 15.2495




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA