Project measure / variable:   Lake3   accel1

ID, description, units MPD:19021   accel1   latency to fall from accelerating rotarod, 60 rpm/min   [s]  trial1  
Data set, strains Lake3   B6.A consomic w/par   23 strains     sex: both     age: 8-9wks
Procedure rotarod
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  STRAIN COMPARISON PLOT
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Lake3 - latency to fall from accelerating rotarod, 60 rpm/min trial1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means11.9   s 12.1   s
Median of the strain means11.6   s 10.9   s
SD of the strain means± 1.52 ± 2.99
Coefficient of variation (CV)0.127 0.247
Min–max range of strain means9.12   –   15.4   s 7.00   –   17.2   s
Mean sample size per strain8.4   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5.4693 5.4693 0.2026 0.6529
strain 22 1315.1705 59.7805 2.2149 0.0015
sex:strain 22 752.4788 34.2036 1.2673 0.1903
Residuals 336 9068.6196 26.9899


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 9.12 7.89   16 1.97 0.865 1.0, 25.0 -1.87
A/J m 7.0 2.27   8 0.802 0.324 4.0, 10.0 -1.71
B6.A-Chr1 f 11.5 6.55   8 2.31 0.569 2.0, 22.0 -0.3
B6.A-Chr1 m 10.8 3.92   8 1.39 0.365 7.0, 18.0 -0.44
B6.A-Chr10 f 10.4 4.6   8 1.62 0.443 3.0, 17.0 -1.02
B6.A-Chr10 m 10.5 4.81   8 1.7 0.458 2.0, 16.0 -0.54
B6.A-Chr11 f 11.6 6.0   8 2.12 0.516 2.0, 19.0 -0.23
B6.A-Chr11 m 9.0 3.09   10 0.978 0.343 4.0, 14.0 -1.05
B6.A-Chr12 f 11.1 7.22   8 2.55 0.649 2.0, 25.0 -0.56
B6.A-Chr12 m 9.88 3.72   8 1.32 0.377 6.0, 16.0 -0.75
B6.A-Chr13 f 11.6 3.58   5 1.6 0.308 7.0, 15.0 -0.23
B6.A-Chr13 m 10.9 5.4   7 2.04 0.497 1.0, 17.0 -0.41
B6.A-Chr14 f 15.4 5.53   8 1.95 0.36 10.0, 27.0 2.28
B6.A-Chr14 m 15.2 5.97   8 2.11 0.391 9.0, 27.0 1.03
B6.A-Chr15 f 11.0 4.93   8 1.74 0.448 6.0, 22.0 -0.63
B6.A-Chr15 m 10.2 2.66   8 0.94 0.259 7.0, 14.0 -0.64
B6.A-Chr16 f 11.5 5.15   8 1.82 0.448 3.0, 20.0 -0.3
B6.A-Chr16 m 8.38 4.75   8 1.68 0.567 3.0, 14.0 -1.25
B6.A-Chr17 f 12.1 5.06   8 1.79 0.417 6.0, 22.0 0.1
B6.A-Chr17 m 16.2 3.85   8 1.36 0.237 12.0, 23.0 1.36
B6.A-Chr18 f 12.6 6.63   8 2.34 0.525 3.0, 21.0 0.43
B6.A-Chr18 m 17.2 4.27   8 1.51 0.247 10.0, 24.0 1.7
B6.A-Chr19 f 12.4 6.86   8 2.43 0.555 3.0, 22.0 0.3
B6.A-Chr19 m 13.4 5.42   8 1.92 0.405 8.0, 25.0 0.43
B6.A-Chr2 f 10.6 4.24   8 1.5 0.399 4.0, 16.0 -0.89
B6.A-Chr2 m 16.6 4.9   8 1.73 0.295 10.0, 24.0 1.5
B6.A-Chr3 f 14.2 4.77   8 1.69 0.335 6.0, 20.0 1.48
B6.A-Chr3 m 14.5 2.67   8 0.945 0.184 10.0, 17.0 0.79
B6.A-Chr4 f 14.1 4.02   8 1.42 0.284 9.0, 20.0 1.42
B6.A-Chr4 m 9.62 4.37   8 1.55 0.454 4.0, 16.0 -0.84
B6.A-Chr5 f 12.6 6.74   8 2.38 0.534 5.0, 26.0 0.43
B6.A-Chr5 m 10.5 4.63   8 1.64 0.441 5.0, 20.0 -0.54
B6.A-Chr6 f 9.62 5.53   8 1.95 0.574 4.0, 18.0 -1.54
B6.A-Chr6 m 12.0 4.17   8 1.48 0.348 2.0, 15.0 -0.04
B6.A-Chr7 f 13.2 5.9   8 2.09 0.445 5.0, 19.0 0.82
B6.A-Chr7 m 9.0 3.55   8 1.25 0.394 5.0, 15.0 -1.05
B6.A-Chr8 f 11.4 6.95   8 2.46 0.611 2.0, 22.0 -0.36
B6.A-Chr8 m 13.8 5.9   8 2.09 0.429 7.0, 23.0 0.56
B6.A-Chr9 f 14.0 5.24   8 1.85 0.374 5.0, 21.0 1.35
B6.A-Chr9 m 15.9 8.43   8 2.98 0.531 7.0, 27.0 1.26
B6.A-ChrX f 12.0 4.63   8 1.64 0.386 4.0, 18.0 0.03
B6.A-ChrX m 9.88 2.23   8 0.789 0.226 7.0, 13.0 -0.75
B6.A-ChrY f 10.6 5.34   8 1.89 0.503 3.0, 18.0 -0.89
B6.A-ChrY m 15.5 2.51   8 0.886 0.162 11.0, 19.0 1.13
C57BL/6J f 12.2 5.56   16 1.39 0.457 1.0, 20.0 0.17
C57BL/6J m 12.9 1.96   8 0.693 0.152 10.0, 16.0 0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 9.125 1.2988 11.6798 6.5702
A/J m 7.0 1.8368 10.613 3.387
B6.A-Chr1 f 11.5 1.8368 15.113 7.887
B6.A-Chr1 m 10.75 1.8368 14.363 7.137
B6.A-Chr10 f 10.375 1.8368 13.988 6.762
B6.A-Chr10 m 10.5 1.8368 14.113 6.887
B6.A-Chr11 f 11.625 1.8368 15.238 8.012
B6.A-Chr11 m 9.0 1.6429 12.2316 5.7684
B6.A-Chr12 f 11.125 1.8368 14.738 7.512
B6.A-Chr12 m 9.875 1.8368 13.488 6.262
B6.A-Chr13 f 11.6 2.3234 16.1702 7.0298
B6.A-Chr13 m 10.8571 1.9636 14.7196 6.9947
B6.A-Chr14 f 15.375 1.8368 18.988 11.762
B6.A-Chr14 m 15.25 1.8368 18.863 11.637
B6.A-Chr15 f 11.0 1.8368 14.613 7.387
B6.A-Chr15 m 10.25 1.8368 13.863 6.637
B6.A-Chr16 f 11.5 1.8368 15.113 7.887
B6.A-Chr16 m 8.375 1.8368 11.988 4.762
B6.A-Chr17 f 12.125 1.8368 15.738 8.512
B6.A-Chr17 m 16.25 1.8368 19.863 12.637
B6.A-Chr18 f 12.625 1.8368 16.238 9.012
B6.A-Chr18 m 17.25 1.8368 20.863 13.637
B6.A-Chr19 f 12.375 1.8368 15.988 8.762
B6.A-Chr19 m 13.375 1.8368 16.988 9.762
B6.A-Chr2 f 10.625 1.8368 14.238 7.012
B6.A-Chr2 m 16.625 1.8368 20.238 13.012
B6.A-Chr3 f 14.25 1.8368 17.863 10.637
B6.A-Chr3 m 14.5 1.8368 18.113 10.887
B6.A-Chr4 f 14.125 1.8368 17.738 10.512
B6.A-Chr4 m 9.625 1.8368 13.238 6.012
B6.A-Chr5 f 12.625 1.8368 16.238 9.012
B6.A-Chr5 m 10.5 1.8368 14.113 6.887
B6.A-Chr6 f 9.625 1.8368 13.238 6.012
B6.A-Chr6 m 12.0 1.8368 15.613 8.387
B6.A-Chr7 f 13.25 1.8368 16.863 9.637
B6.A-Chr7 m 9.0 1.8368 12.613 5.387
B6.A-Chr8 f 11.375 1.8368 14.988 7.762
B6.A-Chr8 m 13.75 1.8368 17.363 10.137
B6.A-Chr9 f 14.0 1.8368 17.613 10.387
B6.A-Chr9 m 15.875 1.8368 19.488 12.262
B6.A-ChrX f 12.0 1.8368 15.613 8.387
B6.A-ChrX m 9.875 1.8368 13.488 6.262
B6.A-ChrY f 10.625 1.8368 14.238 7.012
B6.A-ChrY m 15.5 1.8368 19.113 11.887
C57BL/6J f 12.1875 1.2988 14.7423 9.6327
C57BL/6J m 12.875 1.8368 16.488 9.262


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 8.0625 1.1248 10.275 5.85
B6.A-Chr1 both 11.125 1.2988 13.6798 8.5702
B6.A-Chr10 both 10.4375 1.2988 12.9923 7.8827
B6.A-Chr11 both 10.3125 1.2321 12.7362 7.8888
B6.A-Chr12 both 10.5 1.2988 13.0548 7.9452
B6.A-Chr13 both 11.2286 1.521 14.2204 8.2367
B6.A-Chr14 both 15.3125 1.2988 17.8673 12.7577
B6.A-Chr15 both 10.625 1.2988 13.1798 8.0702
B6.A-Chr16 both 9.9375 1.2988 12.4923 7.3827
B6.A-Chr17 both 14.1875 1.2988 16.7423 11.6327
B6.A-Chr18 both 14.9375 1.2988 17.4923 12.3827
B6.A-Chr19 both 12.875 1.2988 15.4298 10.3202
B6.A-Chr2 both 13.625 1.2988 16.1798 11.0702
B6.A-Chr3 both 14.375 1.2988 16.9298 11.8202
B6.A-Chr4 both 11.875 1.2988 14.4298 9.3202
B6.A-Chr5 both 11.5625 1.2988 14.1173 9.0077
B6.A-Chr6 both 10.8125 1.2988 13.3673 8.2577
B6.A-Chr7 both 11.125 1.2988 13.6798 8.5702
B6.A-Chr8 both 12.5625 1.2988 15.1173 10.0077
B6.A-Chr9 both 14.9375 1.2988 17.4923 12.3827
B6.A-ChrX both 10.9375 1.2988 13.4923 8.3827
B6.A-ChrY both 13.0625 1.2988 15.6173 10.5077
C57BL/6J both 12.5312 1.1248 14.7438 10.3187




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA