Phenotype measure:   Lake3   constant3

ID, description, units MPD:19020   constant3   latency to fall from 4 rpm rotarod   [s]  trial3
Data set, strains Lake3   B6.A consomic w/par   23 strains     sex: both     age: 8-9wks
Procedure rotarod
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake3 - latency to fall from 4 rpm rotarod trial3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means55.7   s 54.1   s
Median of the strain means60.0   s 56.6   s
SD of the strain means± 7.93 ± 7.65
Coefficient of variation (CV)0.143 0.141
Min–max range of strain means28.1   –   60.0   s 28.9   –   60.0   s
Mean sample size per strain8.4   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 16.084 16.084 0.0991 0.7531
strain 22 22493.2052 1022.4184 6.2999 < 0.0001
sex:strain 22 4672.2744 212.3761 1.3086 0.1617
Residuals 336 54529.6196 162.2905


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 28.1 19.5   16 4.87 0.694 2.0, 60.0 -3.48
A/J m 28.9 21.8   8 7.71 0.756 7.0, 60.0 -3.3
B6.A-Chr1 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr1 m 46.6 24.8   8 8.76 0.531 6.0, 60.0 -0.98
B6.A-Chr10 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr10 m 48.1 22.2   8 7.84 0.461 7.0, 60.0 -0.79
B6.A-Chr11 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr11 m 60.0 0.0   10 0.0 0.0 60.0, 60.0 0.77
B6.A-Chr12 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr12 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.77
B6.A-Chr13 f 50.6 18.4   5 8.21 0.363 18.0, 60.0 -0.64
B6.A-Chr13 m 41.9 21.5   7 8.11 0.512 5.0, 60.0 -1.6
B6.A-Chr14 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr14 m 58.2 4.95   8 1.75 0.085 46.0, 60.0 0.53
B6.A-Chr15 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr15 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.77
B6.A-Chr16 f 48.4 18.7   8 6.61 0.387 11.0, 60.0 -0.92
B6.A-Chr16 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.77
B6.A-Chr17 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr17 m 48.1 22.4   8 7.9 0.464 5.0, 60.0 -0.79
B6.A-Chr18 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr18 m 53.0 16.1   8 5.71 0.305 14.0, 60.0 -0.15
B6.A-Chr19 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr19 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.77
B6.A-Chr2 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr2 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.77
B6.A-Chr3 f 52.6 20.9   8 7.38 0.396 1.0, 60.0 -0.39
B6.A-Chr3 m 53.4 18.7   8 6.62 0.351 7.0, 60.0 -0.09
B6.A-Chr4 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr4 m 50.2 20.5   8 7.23 0.407 3.0, 60.0 -0.51
B6.A-Chr5 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr5 m 56.6 9.55   8 3.38 0.169 33.0, 60.0 0.32
B6.A-Chr6 f 55.5 9.9   8 3.5 0.178 32.0, 60.0 -0.02
B6.A-Chr6 m 52.8 20.5   8 7.25 0.389 2.0, 60.0 -0.17
B6.A-Chr7 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr7 m 53.4 18.7   8 6.62 0.351 7.0, 60.0 -0.09
B6.A-Chr8 f 46.6 24.9   8 8.8 0.534 2.0, 60.0 -1.14
B6.A-Chr8 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.77
B6.A-Chr9 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.55
B6.A-Chr9 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.77
B6.A-ChrX f 59.5 1.41   8 0.5 0.0238 56.0, 60.0 0.48
B6.A-ChrX m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.77
B6.A-ChrY f 42.4 22.5   8 7.95 0.531 8.0, 60.0 -1.67
B6.A-ChrY m 55.2 13.4   8 4.75 0.243 22.0, 60.0 0.14
C57BL/6J f 56.8 9.24   16 2.31 0.163 27.0, 60.0 0.14
C57BL/6J m 58.5 4.24   8 1.5 0.0725 48.0, 60.0 0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 28.0625 3.1848 34.3272 21.7978
A/J m 28.875 4.504 37.7347 20.0153
B6.A-Chr1 f 60.0 4.504 68.8597 51.1403
B6.A-Chr1 m 46.625 4.504 55.4847 37.7653
B6.A-Chr10 f 60.0 4.504 68.8597 51.1403
B6.A-Chr10 m 48.125 4.504 56.9847 39.2653
B6.A-Chr11 f 60.0 4.504 68.8597 51.1403
B6.A-Chr11 m 60.0 4.0285 67.9243 52.0757
B6.A-Chr12 f 60.0 4.504 68.8597 51.1403
B6.A-Chr12 m 60.0 4.504 68.8597 51.1403
B6.A-Chr13 f 50.6 5.6972 61.8067 39.3933
B6.A-Chr13 m 41.8571 4.815 51.3285 32.3858
B6.A-Chr14 f 60.0 4.504 68.8597 51.1403
B6.A-Chr14 m 58.25 4.504 67.1097 49.3903
B6.A-Chr15 f 60.0 4.504 68.8597 51.1403
B6.A-Chr15 m 60.0 4.504 68.8597 51.1403
B6.A-Chr16 f 48.375 4.504 57.2347 39.5153
B6.A-Chr16 m 60.0 4.504 68.8597 51.1403
B6.A-Chr17 f 60.0 4.504 68.8597 51.1403
B6.A-Chr17 m 48.125 4.504 56.9847 39.2653
B6.A-Chr18 f 60.0 4.504 68.8597 51.1403
B6.A-Chr18 m 53.0 4.504 61.8597 44.1403
B6.A-Chr19 f 60.0 4.504 68.8597 51.1403
B6.A-Chr19 m 60.0 4.504 68.8597 51.1403
B6.A-Chr2 f 60.0 4.504 68.8597 51.1403
B6.A-Chr2 m 60.0 4.504 68.8597 51.1403
B6.A-Chr3 f 52.625 4.504 61.4847 43.7653
B6.A-Chr3 m 53.375 4.504 62.2347 44.5153
B6.A-Chr4 f 60.0 4.504 68.8597 51.1403
B6.A-Chr4 m 50.25 4.504 59.1097 41.3903
B6.A-Chr5 f 60.0 4.504 68.8597 51.1403
B6.A-Chr5 m 56.625 4.504 65.4847 47.7653
B6.A-Chr6 f 55.5 4.504 64.3597 46.6403
B6.A-Chr6 m 52.75 4.504 61.6097 43.8903
B6.A-Chr7 f 60.0 4.504 68.8597 51.1403
B6.A-Chr7 m 53.375 4.504 62.2347 44.5153
B6.A-Chr8 f 46.625 4.504 55.4847 37.7653
B6.A-Chr8 m 60.0 4.504 68.8597 51.1403
B6.A-Chr9 f 60.0 4.504 68.8597 51.1403
B6.A-Chr9 m 60.0 4.504 68.8597 51.1403
B6.A-ChrX f 59.5 4.504 68.3597 50.6403
B6.A-ChrX m 60.0 4.504 68.8597 51.1403
B6.A-ChrY f 42.375 4.504 51.2347 33.5153
B6.A-ChrY m 55.25 4.504 64.1097 46.3903
C57BL/6J f 56.75 3.1848 63.0147 50.4853
C57BL/6J m 58.5 4.504 67.3597 49.6403


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 28.4687 2.7581 33.8942 23.0433
B6.A-Chr1 both 53.3125 3.1848 59.5772 47.0478
B6.A-Chr10 both 54.0625 3.1848 60.3272 47.7978
B6.A-Chr11 both 60.0 3.0214 65.9432 54.0568
B6.A-Chr12 both 60.0 3.1848 66.2647 53.7353
B6.A-Chr13 both 46.2286 3.7297 53.5651 38.8921
B6.A-Chr14 both 59.125 3.1848 65.3897 52.8603
B6.A-Chr15 both 60.0 3.1848 66.2647 53.7353
B6.A-Chr16 both 54.1875 3.1848 60.4522 47.9228
B6.A-Chr17 both 54.0625 3.1848 60.3272 47.7978
B6.A-Chr18 both 56.5 3.1848 62.7647 50.2353
B6.A-Chr19 both 60.0 3.1848 66.2647 53.7353
B6.A-Chr2 both 60.0 3.1848 66.2647 53.7353
B6.A-Chr3 both 53.0 3.1848 59.2647 46.7353
B6.A-Chr4 both 55.125 3.1848 61.3897 48.8603
B6.A-Chr5 both 58.3125 3.1848 64.5772 52.0478
B6.A-Chr6 both 54.125 3.1848 60.3897 47.8603
B6.A-Chr7 both 56.6875 3.1848 62.9522 50.4228
B6.A-Chr8 both 53.3125 3.1848 59.5772 47.0478
B6.A-Chr9 both 60.0 3.1848 66.2647 53.7353
B6.A-ChrX both 59.75 3.1848 66.0147 53.4853
B6.A-ChrY both 48.8125 3.1848 55.0772 42.5478
C57BL/6J both 57.625 2.7581 63.0504 52.1996




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA