Phenotype measure:   Lake3   constant1

ID, description, units MPD:19018   constant1   latency to fall from 4 rpm rotarod   [s]  trial1
Data set, strains Lake3   B6.A consomic w/par   23 strains     sex: both     age: 8-9wks
Procedure rotarod
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake3 - latency to fall from 4 rpm rotarod trial1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means49.1   s 46.0   s
Median of the strain means50.8   s 49.7   s
SD of the strain means± 9.60 ± 11.2
Coefficient of variation (CV)0.196 0.245
Min–max range of strain means20.2   –   60.0   s 18.9   –   60.0   s
Mean sample size per strain8.4   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 297.8722 297.8722 0.8812 0.3485
strain 22 36472.0159 1657.8189 4.9044 < 0.0001
sex:strain 22 8066.0679 366.6395 1.0846 0.3615
Residuals 336 113576.9786 338.0267


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 20.2 19.1   16 4.78 0.947 2.0, 60.0 -3.01
A/J m 18.9 18.2   8 6.45 0.967 2.0, 60.0 -2.41
B6.A-Chr1 f 40.1 27.7   8 9.81 0.691 2.0, 60.0 -0.94
B6.A-Chr1 m 37.9 21.4   8 7.58 0.566 10.0, 60.0 -0.72
B6.A-Chr10 f 56.2 10.6   8 3.75 0.189 30.0, 60.0 0.74
B6.A-Chr10 m 31.9 24.0   8 8.5 0.754 5.0, 60.0 -1.25
B6.A-Chr11 f 54.0 17.0   8 6.0 0.314 12.0, 60.0 0.51
B6.A-Chr11 m 49.7 21.7   10 6.87 0.437 8.0, 60.0 0.33
B6.A-Chr12 f 54.1 12.0   8 4.24 0.222 27.0, 60.0 0.52
B6.A-Chr12 m 53.6 18.0   8 6.37 0.336 9.0, 60.0 0.68
B6.A-Chr13 f 33.6 27.3   5 12.2 0.814 4.0, 60.0 -1.62
B6.A-Chr13 m 30.7 17.7   7 6.69 0.576 7.0, 60.0 -1.36
B6.A-Chr14 f 50.1 14.4   8 5.08 0.287 25.0, 60.0 0.1
B6.A-Chr14 m 56.5 9.9   8 3.5 0.175 32.0, 60.0 0.94
B6.A-Chr15 f 55.0 14.1   8 5.0 0.257 20.0, 60.0 0.61
B6.A-Chr15 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 1.25
B6.A-Chr16 f 45.2 21.9   8 7.74 0.484 5.0, 60.0 -0.41
B6.A-Chr16 m 40.5 27.1   8 9.57 0.669 2.0, 60.0 -0.49
B6.A-Chr17 f 54.8 10.4   8 3.68 0.19 32.0, 60.0 0.59
B6.A-Chr17 m 40.5 27.0   8 9.55 0.667 3.0, 60.0 -0.49
B6.A-Chr18 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 1.13
B6.A-Chr18 m 50.6 17.9   8 6.34 0.354 14.0, 60.0 0.41
B6.A-Chr19 f 50.8 19.4   8 6.86 0.382 6.0, 60.0 0.17
B6.A-Chr19 m 39.5 28.3   8 10.0 0.717 4.0, 60.0 -0.57
B6.A-Chr2 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 1.13
B6.A-Chr2 m 56.1 10.2   8 3.6 0.181 31.0, 60.0 0.9
B6.A-Chr3 f 52.1 18.1   8 6.4 0.347 8.0, 60.0 0.31
B6.A-Chr3 m 54.8 14.8   8 5.25 0.271 18.0, 60.0 0.79
B6.A-Chr4 f 47.8 22.7   8 8.02 0.475 10.0, 60.0 -0.14
B6.A-Chr4 m 36.8 20.9   8 7.39 0.569 17.0, 60.0 -0.81
B6.A-Chr5 f 59.8 0.707   8 0.25 0.0118 58.0, 60.0 1.11
B6.A-Chr5 m 46.4 21.4   8 7.57 0.462 8.0, 60.0 0.04
B6.A-Chr6 f 42.8 22.9   8 8.09 0.535 2.0, 60.0 -0.66
B6.A-Chr6 m 28.8 26.4   8 9.34 0.919 3.0, 60.0 -1.53
B6.A-Chr7 f 56.5 8.75   8 3.09 0.155 35.0, 60.0 0.77
B6.A-Chr7 m 46.9 24.5   8 8.65 0.522 2.0, 60.0 0.08
B6.A-Chr8 f 50.1 16.7   8 5.91 0.334 11.0, 60.0 0.1
B6.A-Chr8 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 1.25
B6.A-Chr9 f 58.9 3.18   8 1.12 0.054 51.0, 60.0 1.02
B6.A-Chr9 m 57.4 7.42   8 2.62 0.129 39.0, 60.0 1.02
B6.A-ChrX f 43.5 21.2   8 7.51 0.488 16.0, 60.0 -0.59
B6.A-ChrX m 55.0 14.1   8 5.0 0.257 20.0, 60.0 0.8
B6.A-ChrY f 43.4 19.9   8 7.04 0.459 10.0, 60.0 -0.6
B6.A-ChrY m 53.4 18.7   8 6.62 0.351 7.0, 60.0 0.66
C57BL/6J f 40.8 22.7   16 5.67 0.556 4.0, 60.0 -0.87
C57BL/6J m 51.2 16.4   8 5.81 0.32 20.0, 60.0 0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 20.1875 4.5964 29.2288 11.1462
A/J m 18.875 6.5003 31.6613 6.0887
B6.A-Chr1 f 40.125 6.5003 52.9113 27.3387
B6.A-Chr1 m 37.875 6.5003 50.6613 25.0887
B6.A-Chr10 f 56.25 6.5003 69.0363 43.4637
B6.A-Chr10 m 31.875 6.5003 44.6613 19.0887
B6.A-Chr11 f 54.0 6.5003 66.7863 41.2137
B6.A-Chr11 m 49.7 5.814 61.1364 38.2636
B6.A-Chr12 f 54.125 6.5003 66.9113 41.3387
B6.A-Chr12 m 53.625 6.5003 66.4113 40.8387
B6.A-Chr13 f 33.6 8.2222 49.7736 17.4264
B6.A-Chr13 m 30.7143 6.9491 44.3834 17.0451
B6.A-Chr14 f 50.125 6.5003 62.9113 37.3387
B6.A-Chr14 m 56.5 6.5003 69.2863 43.7137
B6.A-Chr15 f 55.0 6.5003 67.7863 42.2137
B6.A-Chr15 m 60.0 6.5003 72.7863 47.2137
B6.A-Chr16 f 45.25 6.5003 58.0363 32.4637
B6.A-Chr16 m 40.5 6.5003 53.2863 27.7137
B6.A-Chr17 f 54.75 6.5003 67.5363 41.9637
B6.A-Chr17 m 40.5 6.5003 53.2863 27.7137
B6.A-Chr18 f 60.0 6.5003 72.7863 47.2137
B6.A-Chr18 m 50.625 6.5003 63.4113 37.8387
B6.A-Chr19 f 50.75 6.5003 63.5363 37.9637
B6.A-Chr19 m 39.5 6.5003 52.2863 26.7137
B6.A-Chr2 f 60.0 6.5003 72.7863 47.2137
B6.A-Chr2 m 56.125 6.5003 68.9113 43.3387
B6.A-Chr3 f 52.125 6.5003 64.9113 39.3387
B6.A-Chr3 m 54.75 6.5003 67.5363 41.9637
B6.A-Chr4 f 47.75 6.5003 60.5363 34.9637
B6.A-Chr4 m 36.75 6.5003 49.5363 23.9637
B6.A-Chr5 f 59.75 6.5003 72.5363 46.9637
B6.A-Chr5 m 46.375 6.5003 59.1613 33.5887
B6.A-Chr6 f 42.75 6.5003 55.5363 29.9637
B6.A-Chr6 m 28.75 6.5003 41.5363 15.9637
B6.A-Chr7 f 56.5 6.5003 69.2863 43.7137
B6.A-Chr7 m 46.875 6.5003 59.6613 34.0887
B6.A-Chr8 f 50.125 6.5003 62.9113 37.3387
B6.A-Chr8 m 60.0 6.5003 72.7863 47.2137
B6.A-Chr9 f 58.875 6.5003 71.6613 46.0887
B6.A-Chr9 m 57.375 6.5003 70.1613 44.5887
B6.A-ChrX f 43.5 6.5003 56.2863 30.7137
B6.A-ChrX m 55.0 6.5003 67.7863 42.2137
B6.A-ChrY f 43.375 6.5003 56.1613 30.5887
B6.A-ChrY m 53.375 6.5003 66.1613 40.5887
C57BL/6J f 40.8125 4.5964 49.8538 31.7712
C57BL/6J m 51.25 6.5003 64.0363 38.4637


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 19.5312 3.9806 27.3612 11.7013
B6.A-Chr1 both 39.0 4.5964 48.0413 29.9587
B6.A-Chr10 both 44.0625 4.5964 53.1038 35.0212
B6.A-Chr11 both 51.85 4.3605 60.4273 43.2727
B6.A-Chr12 both 53.875 4.5964 62.9163 44.8337
B6.A-Chr13 both 32.1571 5.3827 42.7452 21.5691
B6.A-Chr14 both 53.3125 4.5964 62.3538 44.2712
B6.A-Chr15 both 57.5 4.5964 66.5413 48.4587
B6.A-Chr16 both 42.875 4.5964 51.9163 33.8337
B6.A-Chr17 both 47.625 4.5964 56.6663 38.5837
B6.A-Chr18 both 55.3125 4.5964 64.3538 46.2712
B6.A-Chr19 both 45.125 4.5964 54.1663 36.0837
B6.A-Chr2 both 58.0625 4.5964 67.1038 49.0212
B6.A-Chr3 both 53.4375 4.5964 62.4788 44.3962
B6.A-Chr4 both 42.25 4.5964 51.2913 33.2087
B6.A-Chr5 both 53.0625 4.5964 62.1038 44.0212
B6.A-Chr6 both 35.75 4.5964 44.7913 26.7087
B6.A-Chr7 both 51.6875 4.5964 60.7288 42.6462
B6.A-Chr8 both 55.0625 4.5964 64.1038 46.0212
B6.A-Chr9 both 58.125 4.5964 67.1663 49.0837
B6.A-ChrX both 49.25 4.5964 58.2913 40.2087
B6.A-ChrY both 48.375 4.5964 57.4163 39.3337
C57BL/6J both 46.0312 3.9806 53.8612 38.2013




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA