Phenotype measure:   Lake3   stationary3

ID, description, units MPD:19017   stationary3   rotarod habituation, latency to fall from stationary rotarod   [s]  trial3
Data set, strains Lake3   B6.A consomic w/par   23 strains     sex: both     age: 8-9wks
Procedure rotarod
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake3 - rotarod habituation, latency to fall from stationary rotarod trial3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means59.9   s 59.6   s
Median of the strain means60.0   s 60.0   s
SD of the strain means± 0.354 ± 1.49
Coefficient of variation (CV)0.00592 0.0250
Min–max range of strain means58.3   –   60.0   s 53.6   –   60.0   s
Mean sample size per strain8.4   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 8.022 8.022 0.7394 0.3905
strain 22 214.3952 9.7452 0.8982 0.5976
sex:strain 22 216.8566 9.8571 0.9086 0.5838
Residuals 336 3645.3125 10.8491


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 58.3 6.75   16 1.69 0.116 33.0, 60.0 -4.59
A/J m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr1 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr1 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr10 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr10 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr11 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr11 m 60.0 0.0   10 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr12 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr12 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr13 f 60.0 0.0   5 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr13 m 60.0 0.0   7 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr14 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr14 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr15 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr15 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr16 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr16 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr17 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr17 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr18 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr18 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr19 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr19 m 56.5 9.9   8 3.5 0.175 32.0, 60.0 -2.06
B6.A-Chr2 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr2 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr3 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr3 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr4 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr4 m 53.6 18.0   8 6.37 0.336 9.0, 60.0 -4.0
B6.A-Chr5 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr5 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr6 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr6 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr7 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr7 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr8 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr8 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-Chr9 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-Chr9 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-ChrX f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-ChrX m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
B6.A-ChrY f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.21
B6.A-ChrY m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29
C57BL/6J f 60.0 0.0   16 0.0 0.0 60.0, 60.0 0.21
C57BL/6J m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 58.3125 0.8235 59.9323 56.6927
A/J m 60.0 1.1645 62.2907 57.7093
B6.A-Chr1 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr1 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr10 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr10 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr11 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr11 m 60.0 1.0416 62.0489 57.9511
B6.A-Chr12 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr12 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr13 f 60.0 1.473 62.8975 57.1025
B6.A-Chr13 m 60.0 1.2449 62.4489 57.5511
B6.A-Chr14 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr14 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr15 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr15 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr16 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr16 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr17 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr17 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr18 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr18 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr19 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr19 m 56.5 1.1645 58.7907 54.2093
B6.A-Chr2 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr2 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr3 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr3 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr4 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr4 m 53.625 1.1645 55.9157 51.3343
B6.A-Chr5 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr5 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr6 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr6 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr7 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr7 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr8 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr8 m 60.0 1.1645 62.2907 57.7093
B6.A-Chr9 f 60.0 1.1645 62.2907 57.7093
B6.A-Chr9 m 60.0 1.1645 62.2907 57.7093
B6.A-ChrX f 60.0 1.1645 62.2907 57.7093
B6.A-ChrX m 60.0 1.1645 62.2907 57.7093
B6.A-ChrY f 60.0 1.1645 62.2907 57.7093
B6.A-ChrY m 60.0 1.1645 62.2907 57.7093
C57BL/6J f 60.0 0.8235 61.6198 58.3802
C57BL/6J m 60.0 1.1645 62.2907 57.7093


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 59.1563 0.7131 60.559 57.7535
B6.A-Chr1 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr10 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr11 both 60.0 0.7812 61.5366 58.4634
B6.A-Chr12 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr13 both 60.0 0.9643 61.8969 58.1031
B6.A-Chr14 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr15 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr16 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr17 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr18 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr19 both 58.25 0.8235 59.8698 56.6302
B6.A-Chr2 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr3 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr4 both 56.8125 0.8235 58.4323 55.1927
B6.A-Chr5 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr6 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr7 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr8 both 60.0 0.8235 61.6198 58.3802
B6.A-Chr9 both 60.0 0.8235 61.6198 58.3802
B6.A-ChrX both 60.0 0.8235 61.6198 58.3802
B6.A-ChrY both 60.0 0.8235 61.6198 58.3802
C57BL/6J both 60.0 0.7131 61.4028 58.5972




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA