Project measure / variable:   Lake3   stationary2

ID, description, units MPD:19016   stationary2   rotarod habituation, latency to fall from stationary rotarod   [s]  trial2  
Data set, strains Lake3   B6.A consomic w/par   23 strains     sex: both     age: 8-9wks
Procedure rotarod
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  STRAIN COMPARISON PLOT
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Lake3 - rotarod habituation, latency to fall from stationary rotarod trial2



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means58.4   s 59.0   s
Median of the strain means60.0   s 60.0   s
SD of the strain means± 3.05 ± 2.21
Coefficient of variation (CV)0.0523 0.0374
Min–max range of strain means49.2   –   60.0   s 53.8   –   60.0   s
Mean sample size per strain8.4   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 130.7072 130.7072 1.9094 0.1679
strain 22 1545.7789 70.2627 1.0264 0.4305
sex:strain 22 1676.9309 76.2241 1.1135 0.3296
Residuals 336 23000.9286 68.4551


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 49.2 19.4   16 4.85 0.394 9.0, 60.0 -3.02
A/J m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr1 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr1 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr10 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr10 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr11 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr11 m 60.0 0.0   10 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr12 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr12 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr13 f 60.0 0.0   5 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr13 m 56.3 9.83   7 3.71 0.175 34.0, 60.0 -1.24
B6.A-Chr14 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr14 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr15 f 53.8 17.7   8 6.25 0.329 10.0, 60.0 -1.51
B6.A-Chr15 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr16 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr16 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr17 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr17 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr18 f 54.1 16.6   8 5.87 0.307 13.0, 60.0 -1.42
B6.A-Chr18 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr19 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr19 m 53.8 17.7   8 6.25 0.329 10.0, 60.0 -2.37
B6.A-Chr2 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr2 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr3 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr3 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr4 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr4 m 53.8 17.7   8 6.25 0.329 10.0, 60.0 -2.37
B6.A-Chr5 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr5 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr6 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr6 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr7 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr7 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr8 f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-Chr8 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-Chr9 f 58.5 4.24   8 1.5 0.0725 48.0, 60.0 0.02
B6.A-Chr9 m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
B6.A-ChrX f 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.52
B6.A-ChrX m 53.8 17.7   8 6.25 0.329 10.0, 60.0 -2.37
B6.A-ChrY f 53.6 18.0   8 6.37 0.336 9.0, 60.0 -1.58
B6.A-ChrY m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44
C57BL/6J f 54.6 15.7   16 3.92 0.287 2.0, 60.0 -1.25
C57BL/6J m 60.0 0.0   8 0.0 0.0 60.0, 60.0 0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 49.25 2.0684 53.3187 45.1813
A/J m 60.0 2.9252 65.754 54.246
B6.A-Chr1 f 60.0 2.9252 65.754 54.246
B6.A-Chr1 m 60.0 2.9252 65.754 54.246
B6.A-Chr10 f 60.0 2.9252 65.754 54.246
B6.A-Chr10 m 60.0 2.9252 65.754 54.246
B6.A-Chr11 f 60.0 2.9252 65.754 54.246
B6.A-Chr11 m 60.0 2.6164 65.1466 54.8534
B6.A-Chr12 f 60.0 2.9252 65.754 54.246
B6.A-Chr12 m 60.0 2.9252 65.754 54.246
B6.A-Chr13 f 60.0 3.7001 67.2784 52.7216
B6.A-Chr13 m 56.2857 3.1272 62.437 50.1344
B6.A-Chr14 f 60.0 2.9252 65.754 54.246
B6.A-Chr14 m 60.0 2.9252 65.754 54.246
B6.A-Chr15 f 53.75 2.9252 59.504 47.996
B6.A-Chr15 m 60.0 2.9252 65.754 54.246
B6.A-Chr16 f 60.0 2.9252 65.754 54.246
B6.A-Chr16 m 60.0 2.9252 65.754 54.246
B6.A-Chr17 f 60.0 2.9252 65.754 54.246
B6.A-Chr17 m 60.0 2.9252 65.754 54.246
B6.A-Chr18 f 54.125 2.9252 59.879 48.371
B6.A-Chr18 m 60.0 2.9252 65.754 54.246
B6.A-Chr19 f 60.0 2.9252 65.754 54.246
B6.A-Chr19 m 53.75 2.9252 59.504 47.996
B6.A-Chr2 f 60.0 2.9252 65.754 54.246
B6.A-Chr2 m 60.0 2.9252 65.754 54.246
B6.A-Chr3 f 60.0 2.9252 65.754 54.246
B6.A-Chr3 m 60.0 2.9252 65.754 54.246
B6.A-Chr4 f 60.0 2.9252 65.754 54.246
B6.A-Chr4 m 53.75 2.9252 59.504 47.996
B6.A-Chr5 f 60.0 2.9252 65.754 54.246
B6.A-Chr5 m 60.0 2.9252 65.754 54.246
B6.A-Chr6 f 60.0 2.9252 65.754 54.246
B6.A-Chr6 m 60.0 2.9252 65.754 54.246
B6.A-Chr7 f 60.0 2.9252 65.754 54.246
B6.A-Chr7 m 60.0 2.9252 65.754 54.246
B6.A-Chr8 f 60.0 2.9252 65.754 54.246
B6.A-Chr8 m 60.0 2.9252 65.754 54.246
B6.A-Chr9 f 58.5 2.9252 64.254 52.746
B6.A-Chr9 m 60.0 2.9252 65.754 54.246
B6.A-ChrX f 60.0 2.9252 65.754 54.246
B6.A-ChrX m 53.75 2.9252 59.504 47.996
B6.A-ChrY f 53.625 2.9252 59.379 47.871
B6.A-ChrY m 60.0 2.9252 65.754 54.246
C57BL/6J f 54.625 2.0684 58.6937 50.5563
C57BL/6J m 60.0 2.9252 65.754 54.246


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 54.625 1.7913 58.1486 51.1014
B6.A-Chr1 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr10 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr11 both 60.0 1.9623 63.8599 56.1401
B6.A-Chr12 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr13 both 58.1429 2.4223 62.9077 53.3781
B6.A-Chr14 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr15 both 56.875 2.0684 60.9437 52.8063
B6.A-Chr16 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr17 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr18 both 57.0625 2.0684 61.1312 52.9938
B6.A-Chr19 both 56.875 2.0684 60.9437 52.8063
B6.A-Chr2 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr3 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr4 both 56.875 2.0684 60.9437 52.8063
B6.A-Chr5 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr6 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr7 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr8 both 60.0 2.0684 64.0687 55.9313
B6.A-Chr9 both 59.25 2.0684 63.3187 55.1813
B6.A-ChrX both 56.875 2.0684 60.9437 52.8063
B6.A-ChrY both 56.8125 2.0684 60.8812 52.7438
C57BL/6J both 57.3125 1.7913 60.8361 53.7889




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA