Project measure / variable:   Cheverud1   total_pctfat_hifat

ID, description, units MPD:17883   total_pctfat_hifat   total fat pad weight as percentage of body weight   [%]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - total fat pad weight as percentage of body weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means19.8   % 16.0   %
Median of the strain means19.7   % 15.8   %
SD of the strain means± 6.29 ± 3.53
Coefficient of variation (CV)0.317 0.220
Min–max range of strain means11.3   –   37.0   % 8.96   –   22.2   %
Mean sample size per strain7.9   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1036.4922 1036.4922 43.3934 < 0.0001
strain 15 4053.1583 270.2106 11.3125 < 0.0001
sex:strain 15 1128.0934 75.2062 3.1486 0.0001
Residuals 222 5302.6756 23.8859


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 22.6 2.98   9 0.995 0.132 17.9, 27.0 0.44
LGXSM10 m 16.7 4.16   10 1.32 0.25 9.02, 22.1 0.19
LGXSM15 f 18.7 7.09   9 2.36 0.38 8.35, 30.2 -0.18
LGXSM15 m 13.8 5.4   11 1.63 0.39 6.99, 23.0 -0.63
LGXSM18 f 16.0 2.69   8 0.952 0.168 12.7, 20.4 -0.61
LGXSM18 m 15.2 2.61   8 0.922 0.172 11.5, 18.5 -0.24
LGXSM19 f 22.5 7.66   9 2.55 0.34 8.76, 33.6 0.43
LGXSM19 m 16.8 2.98   8 1.05 0.177 13.0, 19.4 0.22
LGXSM20 f 17.1 2.81   8 0.995 0.165 13.6, 21.1 -0.43
LGXSM20 m 8.96 5.39   6 2.2 0.602 2.81, 15.8 -2.01
LGXSM22 f 25.2 5.91   13 1.64 0.234 20.7, 44.0 0.85
LGXSM22 m 15.1 2.0   12 0.577 0.132 11.8, 18.1 -0.27
LGXSM23 f 20.7 6.99   8 2.47 0.338 6.94, 29.7 0.14
LGXSM23 m 17.9 3.69   8 1.3 0.206 11.0, 21.5 0.53
LGXSM31 f 37.0 6.03   5 2.7 0.163 32.0, 44.1 2.73
LGXSM31 m 21.9 5.1   5 2.28 0.233 13.8, 25.7 1.66
LGXSM33 f 22.4 3.76   7 1.42 0.168 16.9, 26.9 0.41
LGXSM33 m 14.3 1.49   7 0.562 0.104 11.8, 16.3 -0.49
LGXSM35 f 14.3 4.99   7 1.89 0.349 8.18, 22.9 -0.88
LGXSM35 m 15.8 3.29   8 1.16 0.208 11.8, 20.0 -0.07
LGXSM39 f 11.8 5.94   8 2.1 0.502 5.41, 21.9 -1.28
LGXSM39 m 9.76 6.57   9 2.19 0.674 2.69, 20.3 -1.78
LGXSM4 f 14.2 3.98   8 1.41 0.281 8.11, 21.4 -0.89
LGXSM4 m 14.4 1.65   5 0.739 0.115 13.4, 17.3 -0.46
LGXSM45 f 11.3 4.67   5 2.09 0.415 4.05, 15.7 -1.36
LGXSM45 m 15.1 1.54   3 0.889 0.102 13.8, 16.8 -0.27
LGXSM46 f 23.6 6.74   9 2.25 0.286 13.1, 33.1 0.6
LGXSM46 m 19.5 5.04   10 1.59 0.258 13.8, 25.8 0.98
LGXSM48 f 22.2 9.08   7 3.43 0.41 8.6, 33.7 0.38
LGXSM48 m 22.2 3.09   8 1.09 0.139 18.4, 26.3 1.75
LGXSM5 f 17.6 3.37   8 1.19 0.192 12.6, 22.4 -0.35
LGXSM5 m 16.4 2.32   8 0.82 0.141 12.3, 19.8 0.1
SM/J m 18.8 2.58   6 1.05 0.137 14.8, 22.5 0.78


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 22.6 1.6291 25.8105 19.3895
LGXSM10 m 16.672 1.5455 19.7177 13.6263
LGXSM15 f 18.66 1.6291 21.8705 15.4495
LGXSM15 m 13.8336 1.4736 16.7376 10.9296
LGXSM18 f 16.025 1.7279 19.4302 12.6198
LGXSM18 m 15.15 1.7279 18.5552 11.7448
LGXSM19 f 22.5289 1.6291 25.7394 19.3184
LGXSM19 m 16.8125 1.7279 20.2177 13.4073
LGXSM20 f 17.0875 1.7279 20.4927 13.6823
LGXSM20 m 8.9567 1.9952 12.8887 5.0246
LGXSM22 f 25.2385 1.3555 27.9098 22.5672
LGXSM22 m 15.1333 1.4108 17.9137 12.353
LGXSM23 f 20.6675 1.7279 24.0727 17.2623
LGXSM23 m 17.875 1.7279 21.2802 14.4698
LGXSM31 f 37.02 2.1857 41.3273 32.7127
LGXSM31 m 21.9 2.1857 26.2073 17.5927
LGXSM33 f 22.4 1.8472 26.0404 18.7596
LGXSM33 m 14.2714 1.8472 17.9118 10.6311
LGXSM35 f 14.2943 1.8472 17.9346 10.6539
LGXSM35 m 15.85 1.7279 19.2552 12.4448
LGXSM39 f 11.8175 1.7279 15.2227 8.4123
LGXSM39 m 9.7556 1.6291 12.9661 6.5451
LGXSM4 f 14.1762 1.7279 17.5815 10.771
LGXSM4 m 14.38 2.1857 18.6873 10.0727
LGXSM45 f 11.27 2.1857 15.5773 6.9627
LGXSM45 m 15.1 2.8217 20.6607 9.5393
LGXSM46 f 23.6111 1.6291 26.8216 20.4006
LGXSM46 m 19.5 1.5455 22.5457 16.4543
LGXSM48 f 22.1714 1.8472 25.8118 18.5311
LGXSM48 m 22.1875 1.7279 25.5927 18.7823
LGXSM5 f 17.575 1.7279 20.9802 14.1698
LGXSM5 m 16.4375 1.7279 19.8427 13.0323


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 19.636 1.1228 21.8487 17.4233
LGXSM15 both 16.2468 1.0983 18.4113 14.0823
LGXSM18 both 15.5875 1.2218 17.9954 13.1796
LGXSM19 both 19.6707 1.1874 22.0107 17.3307
LGXSM20 both 13.0221 1.3197 15.6229 10.4213
LGXSM22 both 20.1859 0.9782 22.1137 18.2581
LGXSM23 both 19.2713 1.2218 21.6791 16.8634
LGXSM31 both 29.46 1.5455 32.5057 26.4143
LGXSM33 both 18.3357 1.3062 20.9098 15.7616
LGXSM35 both 15.0721 1.2647 17.5645 12.5798
LGXSM39 both 10.7865 1.1874 13.1266 8.4465
LGXSM4 both 14.2781 1.3931 17.0235 11.5327
LGXSM45 both 13.185 1.7846 16.7019 9.6681
LGXSM46 both 21.5556 1.1228 23.7682 19.3429
LGXSM48 both 22.1795 1.2647 24.6718 19.6871
LGXSM5 both 17.0062 1.2218 19.4141 14.5984




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA