Phenotype measure:   Cheverud1   total_fatwt_hifat

ID, description, units MPD:17878   total_fatwt_hifat   total fat pad weight   [g]  high-fat diet
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure fat pad weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Cheverud1 - total fat pad weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means8.84   g 7.64   g
Median of the strain means8.08   g 7.04   g
SD of the strain means± 5.21 ± 2.49
Coefficient of variation (CV)0.590 0.326
Min–max range of strain means3.22   –   25.1   g 3.65   –   13.1   g
Mean sample size per strain7.9   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 66.0492 66.0492 6.4003 0.0121
strain 15 2553.2391 170.2159 16.4943 < 0.0001
sex:strain 15 580.3133 38.6876 3.7489 < 0.0001
Residuals 226 2332.2518 10.3197


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 10.3 2.35   9 0.784 0.229 6.48, 13.7 0.28
LGXSM10 m 7.7 2.51   10 0.795 0.327 3.36, 10.9 0.02
LGXSM15 f 7.35 4.41   9 1.47 0.6 2.62, 16.2 -0.29
LGXSM15 m 6.88 3.76   11 1.13 0.546 2.37, 14.0 -0.3
LGXSM18 f 4.9 1.22   9 0.406 0.248 3.36, 7.47 -0.76
LGXSM18 m 5.75 1.49   8 0.527 0.26 3.57, 7.62 -0.76
LGXSM19 f 10.5 4.5   9 1.5 0.43 2.73, 16.0 0.32
LGXSM19 m 9.36 1.69   8 0.596 0.18 7.01, 11.3 0.69
LGXSM20 f 6.25 1.46   8 0.515 0.233 4.49, 8.89 -0.5
LGXSM20 m 3.65 2.78   6 1.13 0.761 0.77, 6.67 -1.6
LGXSM22 f 13.0 2.18   13 0.605 0.168 10.7, 19.1 0.8
LGXSM22 m 8.11 1.56   12 0.45 0.192 5.26, 10.7 0.19
LGXSM23 f 8.81 4.42   8 1.56 0.502 1.38, 15.4 0.0
LGXSM23 m 8.19 2.59   10 0.82 0.316 3.91, 12.1 0.22
LGXSM31 f 25.1 11.2   5 4.99 0.445 15.8, 40.0 3.12
LGXSM31 m 13.1 3.91   5 1.75 0.298 6.74, 16.9 2.19
LGXSM33 f 10.1 2.33   7 0.882 0.232 6.8, 12.6 0.24
LGXSM33 m 6.9 0.929   7 0.351 0.135 5.43, 8.37 -0.3
LGXSM35 f 5.53 2.92   7 1.1 0.528 2.62, 9.99 -0.63
LGXSM35 m 8.31 2.0   8 0.707 0.241 6.29, 11.2 0.27
LGXSM39 f 4.08 2.12   8 0.751 0.521 1.7, 7.49 -0.91
LGXSM39 m 3.66 3.08   9 1.03 0.84 0.64, 8.55 -1.6
LGXSM4 f 4.83 1.39   8 0.491 0.287 2.74, 6.61 -0.77
LGXSM4 m 7.04 0.901   5 0.403 0.128 6.4, 8.48 -0.24
LGXSM45 f 3.22 1.69   5 0.757 0.526 0.78, 4.82 -1.08
LGXSM45 m 5.77 1.53   3 0.885 0.266 4.02, 6.88 -0.75
LGXSM46 f 9.89 4.33   9 1.44 0.437 3.53, 17.2 0.2
LGXSM46 m 10.0 3.11   10 0.985 0.312 5.57, 14.6 0.95
LGXSM48 f 11.2 6.4   7 2.42 0.571 2.46, 20.8 0.45
LGXSM48 m 11.9 2.63   8 0.931 0.221 8.55, 15.3 1.71
LGXSM5 f 6.31 1.91   8 0.676 0.303 3.98, 9.19 -0.48
LGXSM5 m 6.62 1.43   9 0.477 0.216 4.32, 8.86 -0.41
SM/J m 6.93 1.11   6 0.455 0.161 4.97, 8.12 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 10.2856 1.0708 12.3956 8.1755
LGXSM10 m 7.698 1.0159 9.6998 5.6962
LGXSM15 f 7.3544 1.0708 9.4645 5.2444
LGXSM15 m 6.8818 0.9686 8.7904 4.9732
LGXSM18 f 4.8956 1.0708 7.0056 2.7855
LGXSM18 m 5.745 1.1358 7.983 3.507
LGXSM19 f 10.4522 1.0708 12.5623 8.3422
LGXSM19 m 9.36 1.1358 11.598 7.122
LGXSM20 f 6.2487 1.1358 8.4868 4.0107
LGXSM20 m 3.65 1.3115 6.2343 1.0657
LGXSM22 f 12.9615 0.891 14.7172 11.2059
LGXSM22 m 8.11 0.9273 9.9374 6.2826
LGXSM23 f 8.8063 1.1358 11.0443 6.5682
LGXSM23 m 8.195 1.0159 10.1968 6.1932
LGXSM31 f 25.1 1.4366 27.9309 22.2691
LGXSM31 m 13.108 1.4366 15.9389 10.2771
LGXSM33 f 10.0543 1.2142 12.4469 7.6617
LGXSM33 m 6.9 1.2142 9.2926 4.5074
LGXSM35 f 5.5286 1.2142 7.9211 3.136
LGXSM35 m 8.3063 1.1358 10.5443 6.0682
LGXSM39 f 4.0788 1.1358 6.3168 1.8407
LGXSM39 m 3.6644 1.0708 5.7745 1.5544
LGXSM4 f 4.8325 1.1358 7.0705 2.5945
LGXSM4 m 7.038 1.4366 9.8689 4.2071
LGXSM45 f 3.216 1.4366 6.0469 0.3851
LGXSM45 m 5.77 1.8547 9.4247 2.1153
LGXSM46 f 9.8944 1.0708 12.0045 7.7844
LGXSM46 m 9.999 1.0159 12.0008 7.9972
LGXSM48 f 11.21 1.2142 13.6026 8.8174
LGXSM48 m 11.9025 1.1358 14.1405 9.6645
LGXSM5 f 6.3113 1.1358 8.5493 4.0732
LGXSM5 m 6.62 1.0708 8.73 4.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 8.9918 0.738 10.446 7.5375
LGXSM15 both 7.1181 0.7219 8.5407 5.6955
LGXSM18 both 5.3203 0.7805 6.8582 3.7823
LGXSM19 both 9.9061 0.7805 11.4441 8.3682
LGXSM20 both 4.9494 0.8675 6.6587 3.24
LGXSM22 both 10.5358 0.643 11.8028 9.2687
LGXSM23 both 8.5006 0.7619 10.002 6.9993
LGXSM31 both 19.104 1.0159 21.1058 17.1022
LGXSM33 both 8.4771 0.8586 10.1689 6.7853
LGXSM35 both 6.9174 0.8313 8.5555 5.2793
LGXSM39 both 3.8716 0.7805 5.4095 2.3336
LGXSM4 both 5.9353 0.9157 7.7396 4.1309
LGXSM45 both 4.493 1.173 6.8044 2.1816
LGXSM46 both 9.9467 0.738 11.401 8.4925
LGXSM48 both 11.5563 0.8313 13.1943 9.9182
LGXSM5 both 6.4656 0.7805 8.0036 4.9277




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA