Project measure / variable:   Cheverud1   mesenteric_fatwt_hifat

ID, description, units MPD:17876   mesenteric_fatwt_hifat   mesenteric fat pad weight   [g]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - mesenteric fat pad weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means1.21   g 1.26   g
Median of the strain means0.960   g 1.21   g
SD of the strain means± 0.715 ± 0.419
Coefficient of variation (CV)0.590 0.333
Min–max range of strain means0.520   –   2.88   g 0.648   –   2.22   g
Mean sample size per strain7.9   mice 8.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0674 0.0674 0.1117 0.7385
strain 15 70.1047 4.6736 7.75 < 0.0001
sex:strain 15 14.0688 0.9379 1.5553 0.0877
Residuals 228 137.4952 0.603


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 1.48 0.359   9 0.12 0.242 0.74, 1.96 0.38
LGXSM10 m 1.43 0.464   10 0.147 0.325 0.72, 2.12 0.41
LGXSM15 f 0.854 0.586   9 0.195 0.686 0.16, 2.13 -0.5
LGXSM15 m 1.12 0.511   11 0.154 0.456 0.36, 2.22 -0.33
LGXSM18 f 0.707 0.173   9 0.0576 0.244 0.46, 1.03 -0.71
LGXSM18 m 0.986 0.25   8 0.0884 0.254 0.6, 1.27 -0.65
LGXSM19 f 1.52 0.763   9 0.254 0.503 0.46, 2.62 0.43
LGXSM19 m 1.28 0.479   8 0.169 0.374 0.66, 1.95 0.06
LGXSM20 f 0.96 0.227   8 0.0802 0.236 0.68, 1.41 -0.35
LGXSM20 m 0.75 0.639   6 0.261 0.853 0.01, 1.67 -1.21
LGXSM22 f 2.81 2.6   13 0.722 0.927 1.36, 11.4 2.24
LGXSM22 m 1.67 0.446   12 0.129 0.266 1.13, 2.54 0.99
LGXSM23 f 1.2 0.588   8 0.208 0.491 0.37, 2.23 -0.02
LGXSM23 m 1.45 0.517   10 0.164 0.358 0.84, 2.28 0.46
LGXSM31 f 2.88 1.56   5 0.697 0.542 1.53, 5.06 2.33
LGXSM31 m 2.22 0.746   6 0.304 0.336 1.02, 2.95 2.3
LGXSM33 f 0.933 0.28   7 0.106 0.301 0.61, 1.38 -0.39
LGXSM33 m 1.16 0.572   7 0.216 0.494 0.66, 2.37 -0.23
LGXSM35 f 0.596 0.255   7 0.0963 0.428 0.27, 1.01 -0.86
LGXSM35 m 1.31 0.285   8 0.101 0.218 0.87, 1.77 0.13
LGXSM39 f 0.651 0.448   8 0.158 0.688 0.03, 1.34 -0.78
LGXSM39 m 0.648 0.369   9 0.123 0.57 0.16, 1.29 -1.45
LGXSM4 f 0.688 0.36   8 0.127 0.524 0.32, 1.41 -0.73
LGXSM4 m 0.843 0.147   6 0.06 0.174 0.59, 0.96 -0.99
LGXSM45 f 0.52 0.251   5 0.112 0.483 0.13, 0.77 -0.97
LGXSM45 m 0.89 0.314   3 0.181 0.353 0.55, 1.17 -0.87
LGXSM46 f 1.07 0.458   9 0.153 0.428 0.44, 1.78 -0.2
LGXSM46 m 1.34 0.489   10 0.155 0.365 0.73, 2.01 0.2
LGXSM48 f 1.55 0.942   7 0.356 0.607 0.25, 3.01 0.47
LGXSM48 m 2.0 0.445   8 0.157 0.223 1.4, 2.46 1.78
LGXSM5 f 0.961 0.215   8 0.0758 0.223 0.66, 1.22 -0.35
LGXSM5 m 1.05 0.308   9 0.103 0.293 0.68, 1.7 -0.49
SM/J m 1.21 0.551   6 0.225 0.454 0.81, 2.3 -0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 1.4822 0.2589 1.9923 0.9722
LGXSM10 m 1.428 0.2456 1.9119 0.9441
LGXSM15 f 0.8544 0.2589 1.3645 0.3444
LGXSM15 m 1.1209 0.2341 1.5823 0.6595
LGXSM18 f 0.7067 0.2589 1.2167 0.1966
LGXSM18 m 0.9863 0.2746 1.5272 0.4453
LGXSM19 f 1.5167 0.2589 2.0267 1.0066
LGXSM19 m 1.2825 0.2746 1.8235 0.7415
LGXSM20 f 0.96 0.2746 1.501 0.419
LGXSM20 m 0.75 0.317 1.3747 0.1253
LGXSM22 f 2.8069 0.2154 3.2313 2.3825
LGXSM22 m 1.6742 0.2242 2.1159 1.2324
LGXSM23 f 1.1963 0.2746 1.7372 0.6553
LGXSM23 m 1.446 0.2456 1.9299 0.9621
LGXSM31 f 2.876 0.3473 3.5603 2.1917
LGXSM31 m 2.2167 0.317 2.8414 1.592
LGXSM33 f 0.9329 0.2935 1.5112 0.3545
LGXSM33 m 1.1571 0.2935 1.7355 0.5788
LGXSM35 f 0.5957 0.2935 1.1741 0.0174
LGXSM35 m 1.3088 0.2746 1.8497 0.7678
LGXSM39 f 0.6512 0.2746 1.1922 0.1103
LGXSM39 m 0.6478 0.2589 1.1578 0.1377
LGXSM4 f 0.6875 0.2746 1.2285 0.1465
LGXSM4 m 0.8433 0.317 1.468 0.2186
LGXSM45 f 0.52 0.3473 1.2043 0.0
LGXSM45 m 0.89 0.4483 1.7734 0.0066
LGXSM46 f 1.0711 0.2589 1.5812 0.5611
LGXSM46 m 1.341 0.2456 1.8249 0.8571
LGXSM48 f 1.5529 0.2935 2.1312 0.9745
LGXSM48 m 1.9963 0.2746 2.5372 1.4553
LGXSM5 f 0.9613 0.2746 1.5022 0.4203
LGXSM5 m 1.0522 0.2589 1.5623 0.5422


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 1.4551 0.1784 1.8066 1.1036
LGXSM15 both 0.9877 0.1745 1.3316 0.6438
LGXSM18 both 0.8465 0.1887 1.2182 0.4747
LGXSM19 both 1.3996 0.1887 1.7713 1.0278
LGXSM20 both 0.855 0.2097 1.2682 0.4418
LGXSM22 both 2.2405 0.1554 2.5468 1.9343
LGXSM23 both 1.3211 0.1842 1.684 0.9582
LGXSM31 both 2.5463 0.2351 3.0096 2.0831
LGXSM33 both 1.045 0.2075 1.454 0.636
LGXSM35 both 0.9522 0.201 1.3482 0.5563
LGXSM39 both 0.6495 0.1887 1.0213 0.2778
LGXSM4 both 0.7654 0.2097 1.1786 0.3522
LGXSM45 both 0.705 0.2836 1.2637 0.1463
LGXSM46 both 1.2061 0.1784 1.5576 0.8545
LGXSM48 both 1.7746 0.201 2.1705 1.3786
LGXSM5 both 1.0067 0.1887 1.3785 0.635




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA