Project measure / variable:   Cheverud1   perirenal_fatwt_hifat

ID, description, units MPD:17875   perirenal_fatwt_hifat   perirenal fat pad weight   [g]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - perirenal fat pad weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means1.78   g 1.50   g
Median of the strain means1.50   g 1.34   g
SD of the strain means± 1.04 ± 0.669
Coefficient of variation (CV)0.582 0.447
Min–max range of strain means0.620   –   4.95   g 0.620   –   3.00   g
Mean sample size per strain7.9   mice 8.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.0763 3.0763 5.0158 0.0261
strain 15 123.0706 8.2047 13.3774 < 0.0001
sex:strain 15 24.3183 1.6212 2.6433 0.001
Residuals 227 139.2249 0.6133


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 1.97 0.555   9 0.185 0.282 1.23, 2.78 0.18
LGXSM10 m 1.24 0.523   10 0.165 0.421 0.45, 2.17 -0.39
LGXSM15 f 1.4 0.964   9 0.321 0.69 0.39, 3.34 -0.37
LGXSM15 m 1.34 0.884   11 0.267 0.659 0.43, 2.8 -0.24
LGXSM18 f 1.11 0.487   9 0.162 0.439 0.59, 2.21 -0.65
LGXSM18 m 1.13 0.365   8 0.129 0.323 0.59, 1.58 -0.55
LGXSM19 f 2.17 1.03   9 0.345 0.477 0.56, 3.62 0.37
LGXSM19 m 1.77 0.42   8 0.148 0.237 1.25, 2.39 0.41
LGXSM20 f 1.33 0.411   8 0.145 0.309 0.81, 1.92 -0.44
LGXSM20 m 0.95 0.819   6 0.334 0.862 0.16, 2.03 -0.82
LGXSM22 f 2.7 0.42   13 0.117 0.155 1.9, 3.27 0.88
LGXSM22 m 1.94 0.627   12 0.181 0.324 1.05, 3.3 0.66
LGXSM23 f 1.59 1.14   8 0.402 0.716 0.18, 3.28 -0.19
LGXSM23 m 1.19 0.484   10 0.153 0.405 0.6, 2.3 -0.46
LGXSM31 f 4.95 2.52   5 1.13 0.51 2.73, 8.24 3.05
LGXSM31 m 2.65 0.871   5 0.389 0.328 1.67, 3.98 1.72
LGXSM33 f 1.9 0.543   7 0.205 0.286 1.01, 2.43 0.11
LGXSM33 m 1.42 0.354   7 0.134 0.249 1.0, 2.03 -0.12
LGXSM35 f 1.14 0.664   7 0.251 0.582 0.53, 2.52 -0.62
LGXSM35 m 2.26 1.2   8 0.423 0.53 1.12, 4.5 1.14
LGXSM39 f 0.817 0.524   8 0.185 0.641 0.25, 1.71 -0.93
LGXSM39 m 0.62 0.658   9 0.219 1.06 0.01, 1.86 -1.31
LGXSM4 f 1.06 0.257   8 0.091 0.243 0.65, 1.48 -0.7
LGXSM4 m 1.44 0.246   6 0.1 0.17 1.12, 1.8 -0.09
LGXSM45 f 0.62 0.37   5 0.165 0.596 0.18, 1.14 -1.12
LGXSM45 m 0.703 0.143   3 0.0825 0.203 0.58, 0.86 -1.19
LGXSM46 f 1.83 0.647   9 0.216 0.354 0.82, 3.13 0.04
LGXSM46 m 1.85 0.501   10 0.158 0.272 0.96, 2.4 0.53
LGXSM48 f 2.67 1.72   7 0.65 0.643 0.63, 5.28 0.85
LGXSM48 m 3.0 1.07   8 0.377 0.355 1.81, 4.22 2.25
LGXSM5 f 1.28 0.434   8 0.153 0.339 0.56, 2.06 -0.48
LGXSM5 m 1.09 0.396   9 0.132 0.363 0.62, 1.84 -0.61
SM/J m 0.867 0.334   6 0.136 0.386 0.38, 1.39 -0.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 1.9722 0.2611 2.4866 1.4578
LGXSM10 m 1.244 0.2477 1.732 0.756
LGXSM15 f 1.3978 0.2611 1.9122 0.8834
LGXSM15 m 1.3427 0.2361 1.808 0.8774
LGXSM18 f 1.1089 0.2611 1.6233 0.5945
LGXSM18 m 1.13 0.2769 1.6756 0.5844
LGXSM19 f 2.1667 0.2611 2.6811 1.6523
LGXSM19 m 1.7712 0.2769 2.3168 1.2257
LGXSM20 f 1.3337 0.2769 1.8793 0.7882
LGXSM20 m 0.95 0.3197 1.58 0.32
LGXSM22 f 2.7031 0.2172 3.1311 2.2751
LGXSM22 m 1.9383 0.2261 2.3838 1.4929
LGXSM23 f 1.5862 0.2769 2.1318 1.0407
LGXSM23 m 1.195 0.2477 1.683 0.707
LGXSM31 f 4.946 0.3502 5.6361 4.2559
LGXSM31 m 2.652 0.3502 3.3421 1.9619
LGXSM33 f 1.9014 0.296 2.4847 1.3182
LGXSM33 m 1.4214 0.296 2.0047 0.8382
LGXSM35 f 1.14 0.296 1.7233 0.5567
LGXSM35 m 2.2612 0.2769 2.8068 1.7157
LGXSM39 f 0.8175 0.2769 1.3631 0.2719
LGXSM39 m 0.62 0.2611 1.1344 0.1056
LGXSM4 f 1.06 0.2769 1.6056 0.5144
LGXSM4 m 1.4433 0.3197 2.0733 0.8133
LGXSM45 f 0.62 0.3502 1.3101 0.0
LGXSM45 m 0.7033 0.4522 1.5943 0.0
LGXSM46 f 1.83 0.2611 2.3444 1.3156
LGXSM46 m 1.845 0.2477 2.333 1.357
LGXSM48 f 2.6743 0.296 3.2576 2.091
LGXSM48 m 3.005 0.2769 3.5506 2.4594
LGXSM5 f 1.2775 0.2769 1.8231 0.7319
LGXSM5 m 1.0911 0.2611 1.6055 0.5767


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 1.6081 0.1799 1.9626 1.2536
LGXSM15 both 1.3703 0.176 1.7171 1.0234
LGXSM18 both 1.1194 0.1903 1.4944 0.7445
LGXSM19 both 1.969 0.1903 2.3439 1.594
LGXSM20 both 1.1419 0.2115 1.5586 0.7252
LGXSM22 both 2.3207 0.1568 2.6296 2.0118
LGXSM23 both 1.3906 0.1857 1.7566 1.0246
LGXSM31 both 3.799 0.2477 4.287 3.311
LGXSM33 both 1.6614 0.2093 2.0739 1.249
LGXSM35 both 1.7006 0.2027 2.1 1.3013
LGXSM39 both 0.7187 0.1903 1.0937 0.3438
LGXSM4 both 1.2517 0.2115 1.6684 0.835
LGXSM45 both 0.6617 0.286 1.2252 0.0982
LGXSM46 both 1.8375 0.1799 2.192 1.483
LGXSM48 both 2.8396 0.2027 3.239 2.4403
LGXSM5 both 1.1843 0.1903 1.5592 0.8094




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA