Project measure / variable:   Cheverud1   bw1_hifat

ID, description, units MPD:17851   bw1_hifat   body weight on high-fat diet   [g]  at age 4 wks  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   18 strains     sex: both     age: 12-16wks
Procedure body weight
Ontology mappings

  STRAIN COMPARISON PLOT
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Cheverud1 - body weight on high-fat diet at age 4 wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains18 strains
Mean of the strain means4.32   g 4.07   g
Median of the strain means4.54   g 4.05   g
SD of the strain means± 0.494 ± 0.484
Coefficient of variation (CV)0.114 0.119
Min–max range of strain means3.39   –   4.94   g 3.10   –   4.85   g
Mean sample size per strain8.2   mice 8.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.1232 1.1232 2.2168 0.1378
strain 15 46.0509 3.0701 6.0594 < 0.0001
sex:strain 15 10.0105 0.6674 1.3172 0.1919
Residuals 248 125.6509 0.5067


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LG/J m 3.72 1.35   3 0.779 0.362 2.79, 5.27 -0.73
LGXSM10 f 3.84 0.413   9 0.138 0.107 3.21, 4.35 -0.98
LGXSM10 m 3.81 0.384   12 0.111 0.101 3.23, 4.47 -0.55
LGXSM15 f 4.58 0.708   9 0.236 0.155 3.3, 5.66 0.52
LGXSM15 m 4.64 0.843   12 0.243 0.181 3.48, 6.74 1.17
LGXSM18 f 4.05 0.811   9 0.27 0.2 3.03, 5.14 -0.55
LGXSM18 m 4.05 0.76   9 0.253 0.188 2.85, 5.26 -0.05
LGXSM19 f 4.51 0.55   10 0.174 0.122 3.94, 5.64 0.38
LGXSM19 m 4.51 0.21   8 0.0743 0.0466 4.21, 4.83 0.9
LGXSM20 f 4.23 0.458   8 0.162 0.108 3.43, 4.74 -0.19
LGXSM20 m 4.71 0.88   6 0.359 0.187 3.57, 6.21 1.31
LGXSM22 f 3.76 0.57   14 0.152 0.151 2.63, 4.38 -1.14
LGXSM22 m 3.68 0.628   14 0.168 0.171 2.86, 4.89 -0.81
LGXSM23 f 4.6 1.07   8 0.377 0.232 2.51, 5.87 0.56
LGXSM23 m 4.15 1.02   11 0.307 0.245 2.78, 5.8 0.16
LGXSM31 f 4.94 0.682   5 0.305 0.138 4.38, 5.97 1.25
LGXSM31 m 4.48 0.776   7 0.293 0.173 3.92, 5.9 0.84
LGXSM33 f 4.82 0.848   8 0.3 0.176 3.59, 5.9 1.0
LGXSM33 m 4.85 0.881   9 0.294 0.182 3.59, 6.01 1.6
LGXSM35 f 4.76 0.79   7 0.299 0.166 3.59, 5.66 0.88
LGXSM35 m 4.48 0.771   9 0.257 0.172 2.94, 5.61 0.84
LGXSM39 f 3.61 0.362   9 0.121 0.1 3.01, 4.13 -1.44
LGXSM39 m 3.82 0.896   9 0.299 0.234 2.78, 5.77 -0.52
LGXSM4 f 3.39 0.457   8 0.162 0.135 2.79, 3.92 -1.89
LGXSM4 m 3.74 0.471   8 0.166 0.126 2.72, 4.32 -0.69
LGXSM45 f 4.62 1.46   5 0.655 0.317 3.3, 6.42 0.6
LGXSM45 m 3.1 0.341   4 0.171 0.11 2.83, 3.59 -2.01
LGXSM46 f 3.93 0.501   9 0.167 0.128 3.53, 5.14 -0.8
LGXSM46 m 3.71 0.735   10 0.232 0.198 2.07, 4.5 -0.75
LGXSM48 f 4.85 0.687   8 0.243 0.142 3.89, 5.79 1.06
LGXSM48 m 4.4 0.422   8 0.149 0.0958 3.74, 4.81 0.67
LGXSM5 f 4.69 0.681   8 0.241 0.145 3.52, 5.56 0.74
LGXSM5 m 4.05 0.792   10 0.25 0.196 2.13, 5.06 -0.05
SM/J m 3.43 0.821   6 0.335 0.24 2.22, 3.99 -1.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 3.8433333333 0.2372660943 4.310646856 3.3760198106
LGXSM10 m 3.815 0.2054784651 4.2197053822 3.4102946178
LGXSM15 f 4.5788888889 0.2372660943 5.0462024116 4.1115753662
LGXSM15 m 4.6433333333 0.2054784651 5.0480387155 4.2386279511
LGXSM18 f 4.0477777778 0.2372660943 4.5150913005 3.5804642551
LGXSM18 m 4.0466666667 0.2372660943 4.5139801894 3.579353144
LGXSM19 f 4.512 0.2250903808 4.955332534 4.068667466
LGXSM19 m 4.50875 0.2516586963 5.0044108413 4.0130891587
LGXSM20 f 4.2325 0.2516586963 4.7281608413 3.7368391587
LGXSM20 m 4.7083333333 0.2905904321 5.2806731736 4.1359934931
LGXSM22 f 3.7621428571 0.1902360931 4.1368272345 3.3874584798
LGXSM22 m 3.6764285714 0.1902360931 4.0511129488 3.3017441941
LGXSM23 f 4.6 0.2516586963 5.0956608413 4.1043391587
LGXSM23 m 4.1545454545 0.2146152573 4.5772464403 3.7318444688
LGXSM31 f 4.944 0.3183258693 5.5709668822 4.3170331178
LGXSM31 m 4.4757142857 0.2690344629 5.0055980137 3.9458305577
LGXSM33 f 4.8225 0.2516586963 5.3181608413 4.3268391587
LGXSM33 m 4.8466666667 0.2372660943 5.3139801894 4.379353144
LGXSM35 f 4.7571428571 0.2690344629 5.2870265852 4.2272591291
LGXSM35 m 4.4833333333 0.2372660943 4.950646856 4.0160198106
LGXSM39 f 3.6055555556 0.2372660943 4.0728690783 3.1382420328
LGXSM39 m 3.8244444444 0.2372660943 4.2917579672 3.3571309217
LGXSM4 f 3.39 0.2516586963 3.8856608413 2.8943391587
LGXSM4 m 3.74375 0.2516586963 4.2394108413 3.2480891587
LGXSM45 f 4.624 0.3183258693 5.2509668822 3.9970331178
LGXSM45 m 3.105 0.3558991414 3.8059702841 2.4040297159
LGXSM46 f 3.9255555556 0.2372660943 4.3928690783 3.4582420328
LGXSM46 m 3.709 0.2250903808 4.152332534 3.265667466
LGXSM48 f 4.8475 0.2516586963 5.3431608413 4.3518391587
LGXSM48 m 4.40375 0.2516586963 4.8994108413 3.9080891587
LGXSM5 f 4.69375 0.2516586963 5.1894108413 4.1980891587
LGXSM5 m 4.049 0.2250903808 4.492332534 3.605667466


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 3.8291666667 0.15693677 4.138265508 3.5200678253
LGXSM15 both 4.6111111111 0.15693677 4.9202099525 4.3020122698
LGXSM18 both 4.0472222222 0.1677724642 4.3776627831 3.7167816614
LGXSM19 both 4.510375 0.1688177856 4.8428744005 4.1778755995
LGXSM20 both 4.4704166667 0.1922075042 4.8489838874 4.091849446
LGXSM22 both 3.7192857143 0.1345172314 3.9842275783 3.4543438503
LGXSM23 both 4.3772727273 0.1653721622 4.7029857117 4.0515597428
LGXSM31 both 4.7098571429 0.2083931988 5.1203033137 4.299410972
LGXSM33 both 4.8345833333 0.1729358977 5.1751936672 4.4939729995
LGXSM35 both 4.6202380952 0.1793563086 4.9734939139 4.2669822766
LGXSM39 both 3.715 0.1677724642 4.0454405609 3.3845594391
LGXSM4 both 3.566875 0.1779495707 3.917360142 3.216389858
LGXSM45 both 3.8645 0.238744402 4.3347251616 3.3942748384
LGXSM46 both 3.8172777778 0.1635243705 4.1393513968 3.4952041588
LGXSM48 both 4.625625 0.1779495707 4.976110142 4.275139858
LGXSM5 both 4.371375 0.1688177856 4.7038744005 4.0388755995




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA