Phenotype measure:   Cheverud1   GLU_clear10_ctrl

ID, description, units MPD:17845   GLU_clear10_ctrl   glucose levels, area under curve, glucose tolerance test (serum GLU, 10% glucose i.p., 4h fast)   [AUC]  control diet
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   16 strains     sex: both     age: 10wks
Procedure glucose tolerance
Ontology mappings

  STRAIN COMPARISON PLOT
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Cheverud1 - glucose levels, area under curve, glucose tolerance test (serum GLU, 10% glucose i.p., 4h fast) control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested15 strains16 strains
Mean of the strain means-0.0127   AUC 0.0725   AUC
Median of the strain means-0.0199   AUC 0.0440   AUC
SD of the strain means± 0.0748 ± 0.0947
Coefficient of variation (CV)-5.88 1.31
Min–max range of strain means-0.126   –   0.108   AUC -0.0000909091   –   0.236   AUC
Mean sample size per strain8.2   mice 8.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.4283 0.4283 23.4221 < 0.0001
strain 14 1.1239 0.0803 4.3896 < 0.0001
sex:strain 14 0.5804 0.0415 2.2668 0.0066
Residuals 224 4.0965 0.0183


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
LG/J m 0.043 0.047   3 0.0272 1.09 -0.003, 0.091 -0.31
LGXSM10 f -0.0148 0.105   6 0.043 -7.11 -0.187, 0.092 -0.03
LGXSM10 m 0.0145 0.0743   8 0.0263 5.12 -0.07, 0.144 -0.61
LGXSM15 f -0.00344 0.119   9 0.0398 -34.7 -0.178, 0.169 0.12
LGXSM15 m 0.135 0.13   11 0.0391 0.962 -0.112, 0.4 0.66
LGXSM18 f -0.0991 0.119   9 0.0395 -1.2 -0.237, 0.152 -1.15
LGXSM18 m 0.00813 0.116   8 0.0411 14.3 -0.118, 0.189 -0.68
LGXSM19 f 0.108 0.07   8 0.0247 0.646 0.021, 0.215 1.61
LGXSM19 m 0.232 0.052   8 0.0184 0.224 0.138, 0.319 1.68
LGXSM20 f -0.0458 0.0635   8 0.0224 -1.39 -0.133, 0.066 -0.44
LGXSM20 m 0.0971 0.193   7 0.0729 1.98 -0.256, 0.274 0.26
LGXSM22 f -0.00342 0.0999   12 0.0289 -29.3 -0.188, 0.128 0.12
LGXSM22 m 0.236 0.204   9 0.068 0.865 -0.054, 0.512 1.73
LGXSM23 f -0.0954 0.134   9 0.0446 -1.4 -0.262, 0.134 -1.11
LGXSM23 m 0.135 0.175   14 0.0467 1.3 -0.122, 0.443 0.66
LGXSM31 f -0.052 0.139   3 0.0803 -2.67 -0.156, 0.106 -0.53
LGXSM31 m -0.0168 0.0694   4 0.0347 -4.15 -0.08, 0.052 -0.94
LGXSM33 f 0.0695 0.185   16 0.0463 2.66 -0.125, 0.625 1.1
LGXSM33 m 0.0132 0.182   15 0.0469 13.8 -0.367, 0.28 -0.63
LGXSM38 f 0.0846 0.0749   7 0.0283 0.886 1.3
LGXSM38 m 0.0766 0.105   8 0.0372 1.37 -0.057, 0.175 0.04
LGXSM4 f -0.0579 0.097   8 0.0343 -1.68 -0.199, 0.04 -0.6
LGXSM4 m 0.045 0.139   8 0.049 3.08 -0.141, 0.261 -0.29
LGXSM45 f -0.126 0.0782   4 0.0391 -0.62 -0.229, -0.043 -1.51
LGXSM45 m 0.0193 0.0713   3 0.0412 3.69 -0.048, 0.094 -0.56
LGXSM46 f -0.0199 0.123   9 0.0409 -6.16 -0.209, 0.102 -0.1
LGXSM46 m -9.09091e-05 0.0897   11 0.027 -987.0 -0.178, 0.136 -0.77
LGXSM48 f -0.0432 0.15   10 0.0473 -3.46 -0.348, 0.163 -0.41
LGXSM48 m -0.0891 0.137   8 0.0485 -1.54 -0.244, 0.158 -1.71
LGXSM5 f 0.108 0.121   8 0.0428 1.12 -0.04, 0.246 1.61
LGXSM5 m 0.211 0.209   6 0.0855 0.992 -0.079, 0.519 1.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f -0.0148 0.0552 0.094 -0.1236
LGXSM10 m 0.0145 0.0478 0.1087 -0.0797
LGXSM15 f -0.0034 0.0451 0.0854 -0.0923
LGXSM15 m 0.1349 0.0408 0.2153 0.0546
LGXSM18 f -0.0991 0.0451 -0.0103 -0.1879
LGXSM18 m 0.0081 0.0478 0.1023 -0.0861
LGXSM19 f 0.1082 0.0478 0.2025 0.014
LGXSM19 m 0.2317 0.0478 0.326 0.1375
LGXSM20 f -0.0457 0.0478 0.0485 -0.14
LGXSM20 m 0.0971 0.0511 0.1979 -0.0036
LGXSM22 f -0.0034 0.039 0.0735 -0.0803
LGXSM22 m 0.2359 0.0451 0.3247 0.1471
LGXSM23 f -0.0954 0.0451 -0.0066 -0.1843
LGXSM23 m 0.1349 0.0361 0.2062 0.0637
LGXSM31 f -0.052 0.0781 0.1019 -0.2059
LGXSM31 m -0.0167 0.0676 0.1165 -0.15
LGXSM33 f 0.0695 0.0338 0.1361 0.0029
LGXSM33 m 0.0132 0.0349 0.082 -0.0556
LGXSM38 f 0.0846 0.0511 0.1853 -0.0162
LGXSM38 m 0.0766 0.0478 0.1708 -0.0176
LGXSM4 f -0.0579 0.0478 0.0363 -0.1521
LGXSM4 m 0.045 0.0478 0.1392 -0.0492
LGXSM45 f -0.1262 0.0676 0.007 -0.2595
LGXSM45 m 0.0193 0.0781 0.1732 -0.1345
LGXSM46 f -0.0199 0.0451 0.0689 -0.1087
LGXSM46 m -0.0001 0.0408 0.0803 -0.0804
LGXSM48 f -0.0432 0.0428 0.0411 -0.1275
LGXSM48 m -0.0891 0.0478 0.0051 -0.1833
LGXSM5 f 0.108 0.0478 0.2022 0.0138
LGXSM5 m 0.211 0.0552 0.3198 0.1022


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both -0.0002 0.0365 0.0718 -0.0721
LGXSM15 both 0.0657 0.0304 0.1256 0.0058
LGXSM18 both -0.0455 0.0329 0.0193 -0.1102
LGXSM19 both 0.17 0.0338 0.2366 0.1034
LGXSM20 both 0.0257 0.035 0.0947 -0.0433
LGXSM22 both 0.1162 0.0298 0.175 0.0575
LGXSM23 both 0.0197 0.0289 0.0767 -0.0372
LGXSM31 both -0.0344 0.0516 0.0674 -0.1361
LGXSM33 both 0.0413 0.0243 0.0892 -0.0065
LGXSM38 both 0.0806 0.035 0.1496 0.0116
LGXSM4 both -0.0064 0.0338 0.0602 -0.0731
LGXSM45 both -0.0535 0.0516 0.0483 -0.1552
LGXSM46 both -0.01 0.0304 0.0499 -0.0699
LGXSM48 both -0.0662 0.0321 -0.003 -0.1294
LGXSM5 both 0.1595 0.0365 0.2315 0.0875




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA