Project measure / variable:   Cheverud1   inguinal_pctfat_ctrl

ID, description, units MPD:17832   inguinal_pctfat_ctrl   inguinal fat pad weight as percentage of body weight   [%]  control diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   16 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - inguinal fat pad weight as percentage of body weight control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means3.71   % 3.40   %
Median of the strain means3.38   % 3.58   %
SD of the strain means± 1.58 ± 1.04
Coefficient of variation (CV)0.424 0.305
Min–max range of strain means1.51   –   8.21   % 1.24   –   5.33   %
Mean sample size per strain8.4   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 19.0603 19.0603 5.9632 0.0154
strain 15 274.6043 18.307 5.7275 < 0.0001
sex:strain 15 174.1853 11.6124 3.633 < 0.0001
Residuals 225 719.1792 3.1964


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 5.14 2.05   7 0.773 0.398 2.03, 8.5 0.9
LGXSM10 m 1.7 1.14   8 0.402 0.67 -1.64
LGXSM15 f 3.44 2.01   9 0.67 0.584 0.27, 5.73 -0.17
LGXSM15 m 3.41 1.56   11 0.47 0.457 1.08, 5.75 0.01
LGXSM18 f 4.21 1.34   9 0.447 0.319 1.34, 5.53 0.31
LGXSM18 m 4.32 1.77   8 0.627 0.41 1.45, 6.85 0.89
LGXSM19 f 3.84 2.24   8 0.793 0.585 1.47, 8.32 0.08
LGXSM19 m 3.76 1.29   9 0.43 0.343 1.23, 5.29 0.35
LGXSM20 f 3.21 1.68   8 0.593 0.523 0.73, 6.13 -0.32
LGXSM20 m 2.39 0.748   7 0.283 0.313 1.4, 3.44 -0.97
LGXSM22 f 8.21 1.72   12 0.497 0.21 5.36, 11.0 2.85
LGXSM22 m 3.94 2.38   8 0.842 0.605 0.52
LGXSM23 f 4.9 3.01   10 0.952 0.614 1.22, 9.26 0.75
LGXSM23 m 3.11 1.8   13 0.499 0.579 -0.28
LGXSM31 f 1.73 1.03   3 0.593 0.595 0.57, 2.53 -1.26
LGXSM31 m 3.2 0.733   4 0.366 0.229 2.1, 3.59 -0.19
LGXSM33 f 4.53 2.32   8 0.821 0.512 2.48, 9.28 0.52
LGXSM33 m 5.33 1.26   5 0.566 0.237 3.4, 6.46 1.86
LGXSM35 f 3.02 1.59   8 0.561 0.526 1.44, 5.35 -0.44
LGXSM35 m 3.93 1.49   10 0.471 0.379 2.08, 6.16 0.51
LGXSM39 f 2.86 2.59   10 0.818 0.903 0.05, 8.26 -0.54
LGXSM39 m 1.24 1.38   7 0.523 1.12 -2.08
LGXSM4 f 2.5 1.69   8 0.596 0.674 0.89, 5.72 -0.77
LGXSM4 m 4.25 1.66   7 0.626 0.39 2.07, 7.21 0.82
LGXSM45 f 1.51 0.927   5 0.415 0.615 -1.4
LGXSM45 m 2.5 1.43   3 0.823 0.57 1.15, 3.99 -0.87
LGXSM46 f 3.31 1.88   9 0.627 0.569 1.24, 6.71 -0.26
LGXSM46 m 4.05 1.12   11 0.338 0.277 1.98, 5.94 0.63
LGXSM48 f 4.07 2.29   10 0.724 0.563 0.8, 8.39 0.23
LGXSM48 m 3.86 1.12   8 0.398 0.291 1.78, 4.84 0.44
LGXSM5 f 2.94 1.82   8 0.644 0.62 0.44, 6.45 -0.49
LGXSM5 m 3.4 1.14   6 0.466 0.335 1.5, 4.62 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 5.1443 0.6757 6.4759 3.8127
LGXSM10 m 1.6975 0.6321 2.9431 0.4519
LGXSM15 f 3.4422 0.5959 4.6166 2.2679
LGXSM15 m 3.4109 0.5391 4.4731 2.3487
LGXSM18 f 4.2067 0.5959 5.381 3.0323
LGXSM18 m 4.3225 0.6321 5.5681 3.0769
LGXSM19 f 3.8363 0.6321 5.0818 2.5907
LGXSM19 m 3.7556 0.5959 4.9299 2.5812
LGXSM20 f 3.205 0.6321 4.4506 1.9594
LGXSM20 m 2.3871 0.6757 3.7187 1.0556
LGXSM22 f 8.21 0.5161 9.227 7.193
LGXSM22 m 3.9362 0.6321 5.1818 2.6907
LGXSM23 f 4.905 0.5654 6.0191 3.7909
LGXSM23 m 3.1069 0.4959 4.084 2.1298
LGXSM31 f 1.7267 1.0322 3.7607 0.0
LGXSM31 m 3.1975 0.8939 4.959 1.436
LGXSM33 f 4.5325 0.6321 5.7781 3.2869
LGXSM33 m 5.328 0.7995 6.9036 3.7524
LGXSM35 f 3.0187 0.6321 4.2643 1.7732
LGXSM35 m 3.926 0.5654 5.0401 2.8119
LGXSM39 f 2.864 0.5654 3.9781 1.7499
LGXSM39 m 1.24 0.6757 2.5716 0.0
LGXSM4 f 2.5038 0.6321 3.7493 1.2582
LGXSM4 m 4.2486 0.6757 5.5802 2.917
LGXSM45 f 1.508 0.7995 3.0836 0.0
LGXSM45 m 2.5 1.0322 4.534 0.466
LGXSM46 f 3.3056 0.5959 4.4799 2.1312
LGXSM46 m 4.0491 0.5391 5.1113 2.9869
LGXSM48 f 4.066 0.5654 5.1801 2.9519
LGXSM48 m 3.86 0.6321 5.1056 2.6144
LGXSM5 f 2.9363 0.6321 4.1818 1.6907
LGXSM5 m 3.405 0.7299 4.8433 1.9667


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 3.4209 0.4626 4.3326 2.5092
LGXSM15 both 3.4266 0.4018 4.2183 2.6348
LGXSM18 both 4.2646 0.4344 5.1205 3.4086
LGXSM19 both 3.7959 0.4344 4.6518 2.94
LGXSM20 both 2.7961 0.4626 3.7077 1.8844
LGXSM22 both 6.0731 0.408 6.8771 5.2691
LGXSM23 both 4.006 0.376 4.7469 3.265
LGXSM31 both 2.4621 0.6827 3.8075 1.1167
LGXSM33 both 4.9303 0.5096 5.9345 3.926
LGXSM35 both 3.4724 0.424 4.3079 2.6368
LGXSM39 both 2.052 0.4405 2.9201 1.1839
LGXSM4 both 3.3762 0.4626 4.2878 2.4645
LGXSM45 both 2.004 0.6528 3.2904 0.7176
LGXSM46 both 3.6773 0.4018 4.4691 2.8856
LGXSM48 both 3.963 0.424 4.7986 3.1274
LGXSM5 both 3.1706 0.4828 4.122 2.2193




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA