Phenotype measure:   Cheverud1   perirenal_pctfat_ctrl

ID, description, units MPD:17830   perirenal_pctfat_ctrl   perirenal fat pad weight as percentage of body weight   [%]  control diet   measure
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   16 strains     sex: both     age: 20-30wks
Procedure fat pad weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Cheverud1 - perirenal fat pad weight as percentage of body weight control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means2.62   % 2.31   %
Median of the strain means2.61   % 2.50   %
SD of the strain means± 0.705 ± 0.761
Coefficient of variation (CV)0.269 0.329
Min–max range of strain means1.09   –   3.64   % 0.526   –   3.59   %
Mean sample size per strain8.4   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7.8892 7.8892 7.2475 0.0076
strain 15 66.5132 4.4342 4.0736 < 0.0001
sex:strain 15 52.0895 3.4726 3.1902 0.0001
Residuals 226 246.0089 1.0885


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 3.38 0.754   7 0.285 0.223 1.87, 4.09 1.08
LGXSM10 m 1.36 1.02   8 0.361 0.749 0.15, 3.42 -1.25
LGXSM15 f 2.23 1.21   9 0.404 0.543 0.94, 3.94 -0.55
LGXSM15 m 2.11 0.827   11 0.249 0.393 1.11, 3.62 -0.27
LGXSM18 f 2.27 0.886   9 0.295 0.39 1.07, 3.88 -0.49
LGXSM18 m 2.57 0.752   8 0.266 0.293 1.52, 3.7 0.34
LGXSM19 f 3.46 0.689   8 0.244 0.199 2.41, 4.41 1.2
LGXSM19 m 2.67 0.794   9 0.265 0.298 1.15, 3.88 0.47
LGXSM20 f 3.25 1.78   8 0.631 0.55 0.52, 6.02 0.9
LGXSM20 m 1.87 0.653   7 0.247 0.349 1.21, 3.0 -0.58
LGXSM22 f 3.64 1.19   12 0.342 0.325 1.14, 4.87 1.45
LGXSM22 m 2.01 0.98   8 0.346 0.487 0.1, 3.17 -0.4
LGXSM23 f 3.27 1.97   10 0.624 0.603 0.44, 6.42 0.93
LGXSM23 m 2.09 0.849   13 0.235 0.407 0.24, 3.29 -0.29
LGXSM31 f 1.81 1.17   3 0.675 0.645 0.5, 2.74 -1.15
LGXSM31 m 2.73 0.511   4 0.256 0.188 2.23, 3.41 0.55
LGXSM33 f 2.64 0.576   8 0.203 0.218 2.09, 3.28 0.03
LGXSM33 m 2.44 0.788   5 0.352 0.323 1.48, 3.25 0.17
LGXSM35 f 2.25 0.625   8 0.221 0.278 1.22, 3.06 -0.52
LGXSM35 m 3.17 1.08   10 0.342 0.341 1.74, 4.64 1.12
LGXSM39 f 1.8 0.954   10 0.302 0.53 0.28, 3.18 -1.16
LGXSM39 m 0.526 0.593   7 0.224 1.13 -2.35
LGXSM4 f 2.4 1.71   8 0.606 0.715 1.11, 6.26 -0.31
LGXSM4 m 2.88 0.841   8 0.297 0.292 2.06, 4.65 0.74
LGXSM45 f 1.09 0.324   5 0.145 0.297 0.84, 1.63 -2.17
LGXSM45 m 1.46 0.142   3 0.0817 0.0972 1.37, 1.62 -1.12
LGXSM46 f 2.58 1.33   9 0.442 0.515 0.53, 4.21 -0.05
LGXSM46 m 2.8 0.471   11 0.142 0.169 1.98, 3.8 0.64
LGXSM48 f 2.97 1.13   10 0.357 0.38 0.93, 5.17 0.5
LGXSM48 m 3.59 1.1   8 0.389 0.306 2.21, 5.15 1.68
LGXSM5 f 2.84 1.29   8 0.455 0.453 0.96, 5.07 0.32
LGXSM5 m 2.74 0.595   6 0.243 0.217 1.98, 3.34 0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 3.3771 0.3943 4.1542 2.6001
LGXSM10 m 1.3638 0.3689 2.0906 0.6369
LGXSM15 f 2.23 0.3478 2.9153 1.5447
LGXSM15 m 2.1055 0.3146 2.7253 1.4856
LGXSM18 f 2.2733 0.3478 2.9586 1.588
LGXSM18 m 2.5675 0.3689 3.2944 1.8406
LGXSM19 f 3.4625 0.3689 4.1894 2.7356
LGXSM19 m 2.6678 0.3478 3.3531 1.9825
LGXSM20 f 3.245 0.3689 3.9719 2.5181
LGXSM20 m 1.8714 0.3943 2.6485 1.0944
LGXSM22 f 3.645 0.3012 4.2385 3.0515
LGXSM22 m 2.0125 0.3689 2.7394 1.2856
LGXSM23 f 3.273 0.3299 3.9231 2.6229
LGXSM23 m 2.0869 0.2894 2.6571 1.5167
LGXSM31 f 1.8133 0.6024 3.0003 0.6264
LGXSM31 m 2.725 0.5217 3.7529 1.6971
LGXSM33 f 2.635 0.3689 3.3619 1.9081
LGXSM33 m 2.438 0.4666 3.3574 1.5186
LGXSM35 f 2.2525 0.3689 2.9794 1.5256
LGXSM35 m 3.171 0.3299 3.8211 2.5209
LGXSM39 f 1.799 0.3299 2.4491 1.1489
LGXSM39 m 0.5257 0.3943 1.3028 0.0
LGXSM4 f 2.3975 0.3689 3.1244 1.6706
LGXSM4 m 2.8788 0.3689 3.6056 2.1519
LGXSM45 f 1.09 0.4666 2.0094 0.1706
LGXSM45 m 1.4567 0.6024 2.6436 0.2697
LGXSM46 f 2.5756 0.3478 3.2609 1.8903
LGXSM46 m 2.7973 0.3146 3.4171 2.1774
LGXSM48 f 2.973 0.3299 3.6231 2.3229
LGXSM48 m 3.5938 0.3689 4.3206 2.8669
LGXSM5 f 2.8413 0.3689 3.5681 2.1144
LGXSM5 m 2.74 0.4259 3.5793 1.9007


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 2.3704 0.27 2.9025 1.8384
LGXSM15 both 2.1677 0.2345 2.6298 1.7057
LGXSM18 both 2.4204 0.2535 2.9199 1.9209
LGXSM19 both 3.0651 0.2535 3.5646 2.5656
LGXSM20 both 2.5582 0.27 3.0902 2.0262
LGXSM22 both 2.8288 0.2381 3.2979 2.3596
LGXSM23 both 2.68 0.2194 3.1123 2.2476
LGXSM31 both 2.2692 0.3984 3.0543 1.4841
LGXSM33 both 2.5365 0.2974 3.1225 1.9505
LGXSM35 both 2.7118 0.2474 3.1993 2.2242
LGXSM39 both 1.1624 0.2571 1.6689 0.6558
LGXSM4 both 2.6381 0.2608 3.1521 2.1242
LGXSM45 both 1.2733 0.381 2.024 0.5226
LGXSM46 both 2.6864 0.2345 3.1484 2.2244
LGXSM48 both 3.2834 0.2474 3.771 2.7958
LGXSM5 both 2.7906 0.2817 3.3458 2.2355




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA