Phenotype measure:   Cheverud1   total_fatwt_ctrl

ID, description, units MPD:17828   total_fatwt_ctrl   total fat pad weight   [g]  control diet
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   16 strains     sex: both     age: 20-30wks
Procedure fat pad weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Cheverud1 - total fat pad weight control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means4.50   g 4.89   g
Median of the strain means4.42   g 5.42   g
SD of the strain means± 2.00 ± 1.67
Coefficient of variation (CV)0.443 0.341
Min–max range of strain means1.25   –   9.30   g 1.26   –   7.13   g
Mean sample size per strain8.4   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7.2195 7.2195 1.3346 0.2492
strain 15 511.9552 34.1303 6.3093 < 0.0001
sex:strain 15 342.2645 22.8176 4.218 < 0.0001
Residuals 224 1211.742 5.4096


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 7.04 2.93   7 1.11 0.416 2.74, 11.2 1.27
LGXSM10 m 2.58 1.73   8 0.611 0.67 0.63, 6.16 -1.38
LGXSM15 f 3.24 1.62   9 0.541 0.501 1.01, 5.71 -0.63
LGXSM15 m 4.28 1.69   11 0.508 0.394 1.6, 6.74 -0.37
LGXSM18 f 2.88 0.925   9 0.308 0.321 1.74, 4.9 -0.81
LGXSM18 m 4.55 1.64   8 0.581 0.362 2.4, 6.49 -0.2
LGXSM19 f 5.71 2.6   8 0.918 0.454 2.36, 9.11 0.61
LGXSM19 m 7.13 2.26   9 0.755 0.317 2.63, 9.44 1.34
LGXSM20 f 5.19 3.12   8 1.1 0.601 0.72, 9.86 0.35
LGXSM20 m 3.14 0.994   7 0.376 0.317 1.94, 4.91 -1.05
LGXSM22 f 9.3 2.99   12 0.863 0.322 3.75, 13.6 2.4
LGXSM22 m 4.68 2.17   7 0.822 0.465 0.17, 6.67 -0.13
LGXSM23 f 6.62 5.53   10 1.75 0.836 0.96, 17.3 1.06
LGXSM23 m 5.88 2.54   13 0.704 0.432 0.47, 8.81 0.59
LGXSM31 f 3.41 1.87   3 1.08 0.548 1.29, 4.82 -0.55
LGXSM31 m 5.49 0.933   4 0.467 0.17 4.53, 6.61 0.36
LGXSM33 f 4.99 2.04   8 0.721 0.409 2.2, 7.24 0.24
LGXSM33 m 5.46 0.953   5 0.426 0.175 3.91, 6.11 0.34
LGXSM35 f 3.34 1.02   8 0.36 0.305 1.67, 4.73 -0.58
LGXSM35 m 6.34 2.41   10 0.762 0.38 2.64, 9.07 0.87
LGXSM39 f 2.57 2.09   10 0.662 0.814 0.21, 6.77 -0.97
LGXSM39 m 1.26 1.38   7 0.523 1.1 0.04, 4.15 -2.18
LGXSM4 f 2.93 1.13   8 0.398 0.384 1.6, 4.68 -0.79
LGXSM4 m 5.78 1.44   7 0.542 0.248 3.87, 8.35 0.53
LGXSM45 f 1.25 0.242   5 0.108 0.194 0.89, 1.52 -1.63
LGXSM45 m 3.01 1.22   3 0.705 0.406 1.7, 4.12 -1.13
LGXSM46 f 4.42 2.43   9 0.809 0.548 1.46, 9.39 -0.04
LGXSM46 m 6.31 1.8   11 0.544 0.286 2.77, 9.41 0.85
LGXSM48 f 4.71 2.77   10 0.874 0.587 0.99, 10.8 0.1
LGXSM48 m 6.96 1.92   8 0.677 0.275 4.48, 9.32 1.24
LGXSM5 f 4.42 2.93   8 1.04 0.664 1.24, 11.1 -0.04
LGXSM5 m 5.39 1.48   6 0.603 0.274 3.09, 7.19 0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 7.0386 0.8791 8.7709 5.3062
LGXSM10 m 2.58 0.8223 4.2005 0.9595
LGXSM15 f 3.2433 0.7753 4.7711 1.7156
LGXSM15 m 4.28 0.7013 5.6619 2.8981
LGXSM18 f 2.8844 0.7753 4.4122 1.3567
LGXSM18 m 4.5488 0.8223 6.1692 2.9283
LGXSM19 f 5.7137 0.8223 7.3342 4.0933
LGXSM19 m 7.1333 0.7753 8.6611 5.6056
LGXSM20 f 5.1912 0.8223 6.8117 3.5708
LGXSM20 m 3.1386 0.8791 4.8709 1.4062
LGXSM22 f 9.3025 0.6714 10.6256 7.9794
LGXSM22 m 4.6757 0.8791 6.4081 2.9434
LGXSM23 f 6.618 0.7355 8.0674 5.1686
LGXSM23 m 5.8815 0.6451 7.1527 4.6103
LGXSM31 f 3.4067 1.3428 6.0529 0.7605
LGXSM31 m 5.49 1.1629 7.7817 3.1983
LGXSM33 f 4.9863 0.8223 6.6067 3.3658
LGXSM33 m 5.456 1.0402 7.5057 3.4063
LGXSM35 f 3.3388 0.8223 4.9592 1.7183
LGXSM35 m 6.343 0.7355 7.7924 4.8936
LGXSM39 f 2.571 0.7355 4.0204 1.1216
LGXSM39 m 1.2586 0.8791 2.9909 0.0
LGXSM4 f 2.93 0.8223 4.5505 1.3095
LGXSM4 m 5.7786 0.8791 7.5109 4.0462
LGXSM45 f 1.25 1.0402 3.2997 0.0
LGXSM45 m 3.0067 1.3428 5.6529 0.3605
LGXSM46 f 4.4244 0.7753 5.9522 2.8967
LGXSM46 m 6.3073 0.7013 7.6892 4.9253
LGXSM48 f 4.713 0.7355 6.1624 3.2636
LGXSM48 m 6.9613 0.8223 8.5817 5.3408
LGXSM5 f 4.4187 0.8223 6.0392 2.7983
LGXSM5 m 5.3917 0.9495 7.2628 3.5205


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 4.8093 0.6019 5.9953 3.6232
LGXSM15 both 3.7617 0.5227 4.7917 2.7316
LGXSM18 both 3.7166 0.5651 4.8301 2.603
LGXSM19 both 6.4235 0.5651 7.5371 5.31
LGXSM20 both 4.1649 0.6019 5.351 2.9789
LGXSM22 both 6.9891 0.5531 8.079 5.8992
LGXSM23 both 6.2498 0.4892 7.2137 5.2858
LGXSM31 both 4.4483 0.8882 6.1986 2.698
LGXSM33 both 5.2211 0.663 6.5276 3.9147
LGXSM35 both 4.8409 0.5516 5.9279 3.7538
LGXSM39 both 1.9148 0.5731 3.0441 0.7854
LGXSM4 both 4.3543 0.6019 5.5403 3.1682
LGXSM45 both 2.1283 0.8493 3.8019 0.4547
LGXSM46 both 5.3659 0.5227 6.3959 4.3358
LGXSM48 both 5.8371 0.5516 6.9242 4.7501
LGXSM5 both 4.9052 0.6281 6.1429 3.6676




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA