Project measure / variable:   Cheverud1   perirenal_fatwt_ctrl

ID, description, units MPD:17825   perirenal_fatwt_ctrl   perirenal fat pad weight   [g]  control diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   16 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - perirenal fat pad weight control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means0.889   g 0.972   g
Median of the strain means0.846   g 1.03   g
SD of the strain means± 0.378 ± 0.386
Coefficient of variation (CV)0.426 0.397
Min–max range of strain means0.228   –   1.60   g 0.159   –   1.53   g
Mean sample size per strain8.4   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.3264 0.3264 1.3199 0.2518
strain 15 17.0843 1.139 4.6049 < 0.0001
sex:strain 15 16.7418 1.1161 4.5126 < 0.0001
Residuals 226 55.8973 0.2473


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 1.37 0.454   7 0.172 0.331 0.61, 1.93 1.27
LGXSM10 m 0.5 0.433   8 0.153 0.867 0.04, 1.41 -1.22
LGXSM15 f 0.607 0.35   9 0.117 0.576 0.23, 1.18 -0.74
LGXSM15 m 0.869 0.392   11 0.118 0.45 0.37, 1.53 -0.27
LGXSM18 f 0.566 0.272   9 0.0906 0.48 0.27, 1.14 -0.85
LGXSM18 m 0.92 0.35   8 0.124 0.38 0.38, 1.35 -0.13
LGXSM19 f 1.24 0.345   8 0.122 0.278 0.77, 1.74 0.93
LGXSM19 m 1.36 0.487   9 0.162 0.359 0.43, 1.96 1.01
LGXSM20 f 1.27 0.984   8 0.348 0.775 0.1, 3.17 1.01
LGXSM20 m 0.713 0.335   7 0.127 0.47 0.39, 1.32 -0.67
LGXSM22 f 1.6 0.676   12 0.195 0.423 0.49, 2.42 1.88
LGXSM22 m 0.76 0.389   8 0.138 0.512 0.03, 1.23 -0.55
LGXSM23 f 1.33 1.09   10 0.344 0.819 0.1, 3.2 1.17
LGXSM23 m 0.978 0.454   13 0.126 0.464 0.07, 1.68 0.02
LGXSM31 f 0.597 0.414   3 0.239 0.694 0.13, 0.92 -0.77
LGXSM31 m 1.22 0.262   4 0.131 0.214 1.03, 1.59 0.64
LGXSM33 f 0.89 0.277   8 0.0978 0.311 0.53, 1.38 0.0
LGXSM33 m 1.15 0.438   5 0.196 0.381 0.61, 1.66 0.46
LGXSM35 f 0.682 0.187   8 0.0661 0.274 0.33, 0.89 -0.55
LGXSM35 m 1.49 0.592   10 0.187 0.398 0.62, 2.15 1.34
LGXSM39 f 0.528 0.351   10 0.111 0.664 0.06, 1.06 -0.95
LGXSM39 m 0.159 0.203   7 0.0767 1.28 -2.11
LGXSM4 f 0.648 0.446   8 0.158 0.689 0.28, 1.64 -0.64
LGXSM4 m 1.21 0.44   8 0.156 0.365 0.74, 2.14 0.62
LGXSM45 f 0.228 0.0589   5 0.0263 0.258 0.16, 0.32 -1.75
LGXSM45 m 0.433 0.0702   3 0.0406 0.162 0.36, 0.5 -1.4
LGXSM46 f 0.802 0.506   9 0.169 0.63 0.17, 1.62 -0.23
LGXSM46 m 1.17 0.294   11 0.0888 0.252 0.6, 1.81 0.51
LGXSM48 f 0.945 0.515   10 0.163 0.545 0.22, 2.14 0.15
LGXSM48 m 1.53 0.572   8 0.202 0.374 0.91, 2.34 1.45
LGXSM5 f 0.916 0.599   8 0.212 0.654 0.24, 2.22 0.07
LGXSM5 m 1.09 0.319   6 0.13 0.294 0.66, 1.41 0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 1.3743 0.188 1.7447 1.0039
LGXSM10 m 0.5 0.1758 0.8465 0.1535
LGXSM15 f 0.6067 0.1658 0.9333 0.28
LGXSM15 m 0.8691 0.1499 1.1646 0.5736
LGXSM18 f 0.5656 0.1658 0.8922 0.2389
LGXSM18 m 0.92 0.1758 1.2665 0.5735
LGXSM19 f 1.2388 0.1758 1.5852 0.8923
LGXSM19 m 1.3567 0.1658 1.6833 1.03
LGXSM20 f 1.27 0.1758 1.6165 0.9235
LGXSM20 m 0.7129 0.188 1.0833 0.3425
LGXSM22 f 1.5983 0.1436 1.8812 1.3154
LGXSM22 m 0.76 0.1758 1.1065 0.4135
LGXSM23 f 1.329 0.1573 1.6389 1.0191
LGXSM23 m 0.9785 0.1379 1.2503 0.7067
LGXSM31 f 0.5967 0.2871 1.1625 0.0309
LGXSM31 m 1.2225 0.2487 1.7125 0.7325
LGXSM33 f 0.89 0.1758 1.2365 0.5435
LGXSM33 m 1.148 0.2224 1.5863 0.7097
LGXSM35 f 0.6825 0.1758 1.029 0.336
LGXSM35 m 1.488 0.1573 1.7979 1.1781
LGXSM39 f 0.528 0.1573 0.8379 0.2181
LGXSM39 m 0.1586 0.188 0.529 0.0
LGXSM4 f 0.6475 0.1758 0.994 0.301
LGXSM4 m 1.2063 0.1758 1.5527 0.8598
LGXSM45 f 0.228 0.2224 0.6663 0.0
LGXSM45 m 0.4333 0.2871 0.9991 0.0
LGXSM46 f 0.8022 0.1658 1.1289 0.4756
LGXSM46 m 1.1664 0.1499 1.4618 0.8709
LGXSM48 f 0.945 0.1573 1.2549 0.6351
LGXSM48 m 1.5288 0.1758 1.8752 1.1823
LGXSM5 f 0.9163 0.1758 1.2627 0.5698
LGXSM5 m 1.0867 0.203 1.4867 0.6866


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 0.9371 0.1287 1.1907 0.6835
LGXSM15 both 0.7379 0.1118 0.9581 0.5176
LGXSM18 both 0.7428 0.1208 0.9809 0.5047
LGXSM19 both 1.2977 0.1208 1.5358 1.0596
LGXSM20 both 0.9914 0.1287 1.245 0.7378
LGXSM22 both 1.1792 0.1135 1.4028 0.9555
LGXSM23 both 1.1537 0.1046 1.3598 0.9476
LGXSM31 both 0.9096 0.1899 1.2838 0.5353
LGXSM33 both 1.019 0.1418 1.2983 0.7397
LGXSM35 both 1.0853 0.118 1.3177 0.8528
LGXSM39 both 0.3433 0.1225 0.5848 0.1018
LGXSM4 both 0.9269 0.1243 1.1719 0.6819
LGXSM45 both 0.3307 0.1816 0.6885 0.0
LGXSM46 both 0.9843 0.1118 1.2045 0.7641
LGXSM48 both 1.2369 0.118 1.4693 1.0045
LGXSM5 both 1.0015 0.1343 1.2661 0.7368




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA