Project measure / variable:   Cheverud1   spleenwt_adj_ctrl

ID, description, units MPD:17822   spleenwt_adj_ctrl   spleen weight as percentage of body weight   [%]  control diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   16 strains     sex: both     age: 20-30wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - spleen weight as percentage of body weight control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means0.380   % 0.342   %
Median of the strain means0.360   % 0.335   %
SD of the strain means± 0.0860 ± 0.111
Coefficient of variation (CV)0.227 0.324
Min–max range of strain means0.238   –   0.512   % 0.192   –   0.680   %
Mean sample size per strain8.4   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0785 0.0785 2.8694 0.0917
strain 15 1.9154 0.1277 4.6666 < 0.0001
sex:strain 15 0.4756 0.0317 1.1588 0.3058
Residuals 226 6.1841 0.0274


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 0.49 0.275   7 0.104 0.562 0.3, 1.04 1.28
LGXSM10 m 0.68 0.439   8 0.155 0.646 0.34, 1.63 3.04
LGXSM15 f 0.316 0.086   9 0.0287 0.273 0.2, 0.48 -0.74
LGXSM15 m 0.321 0.0568   11 0.0171 0.177 0.25, 0.43 -0.19
LGXSM18 f 0.363 0.122   9 0.0405 0.335 0.2, 0.53 -0.19
LGXSM18 m 0.269 0.0808   8 0.0286 0.301 0.12, 0.36 -0.66
LGXSM19 f 0.336 0.145   8 0.0511 0.43 0.18, 0.67 -0.51
LGXSM19 m 0.348 0.0728   9 0.0243 0.209 0.27, 0.46 0.05
LGXSM20 f 0.356 0.124   8 0.0438 0.348 0.25, 0.55 -0.28
LGXSM20 m 0.353 0.0793   7 0.03 0.225 0.28, 0.47 0.1
LGXSM22 f 0.238 0.0496   12 0.0143 0.209 0.18, 0.35 -1.65
LGXSM22 m 0.379 0.337   8 0.119 0.89 0.17, 1.2 0.33
LGXSM23 f 0.387 0.117   10 0.0368 0.301 0.22, 0.56 0.08
LGXSM23 m 0.303 0.109   13 0.0302 0.359 0.21, 0.64 -0.35
LGXSM31 f 0.5 0.171   3 0.0985 0.341 0.36, 0.69 1.4
LGXSM31 m 0.367 0.0486   4 0.0243 0.132 0.32, 0.43 0.22
LGXSM33 f 0.44 0.055   8 0.0195 0.125 0.35, 0.52 0.7
LGXSM33 m 0.392 0.136   5 0.0606 0.346 0.24, 0.59 0.45
LGXSM35 f 0.345 0.0566   8 0.02 0.164 0.26, 0.44 -0.4
LGXSM35 m 0.249 0.113   10 0.0356 0.453 0.09, 0.51 -0.84
LGXSM39 f 0.493 0.454   10 0.143 0.92 0.16, 1.57 1.32
LGXSM39 m 0.439 0.125   7 0.0474 0.286 0.3, 0.61 0.87
LGXSM4 f 0.265 0.0595   8 0.021 0.225 0.2, 0.38 -1.33
LGXSM4 m 0.221 0.0864   8 0.0306 0.391 0.1, 0.34 -1.09
LGXSM45 f 0.512 0.0876   5 0.0392 0.171 0.4, 0.63 1.54
LGXSM45 m 0.357 0.0723   3 0.0418 0.203 0.31, 0.44 0.13
LGXSM46 f 0.287 0.0798   9 0.0266 0.279 0.22, 0.42 -1.08
LGXSM46 m 0.192 0.0414   11 0.0125 0.216 0.14, 0.25 -1.35
LGXSM48 f 0.358 0.11   10 0.0349 0.308 0.26, 0.63 -0.25
LGXSM48 m 0.291 0.105   8 0.037 0.359 0.19, 0.46 -0.46
LGXSM5 f 0.389 0.0914   8 0.0323 0.235 0.27, 0.5 0.11
LGXSM5 m 0.317 0.0761   6 0.0311 0.24 0.24, 0.45 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 0.49 0.0625 0.6132 0.3668
LGXSM10 m 0.68 0.0585 0.7952 0.5648
LGXSM15 f 0.3156 0.0551 0.4242 0.2069
LGXSM15 m 0.3209 0.0499 0.4192 0.2226
LGXSM18 f 0.3633 0.0551 0.472 0.2547
LGXSM18 m 0.2687 0.0585 0.384 0.1535
LGXSM19 f 0.3362 0.0585 0.4515 0.221
LGXSM19 m 0.3478 0.0551 0.4564 0.2391
LGXSM20 f 0.3562 0.0585 0.4715 0.241
LGXSM20 m 0.3529 0.0625 0.4761 0.2297
LGXSM22 f 0.2375 0.0478 0.3316 0.1434
LGXSM22 m 0.3787 0.0585 0.494 0.2635
LGXSM23 f 0.387 0.0523 0.4901 0.2839
LGXSM23 m 0.3031 0.0459 0.3935 0.2127
LGXSM31 f 0.5 0.0955 0.6882 0.3118
LGXSM31 m 0.3675 0.0827 0.5305 0.2045
LGXSM33 f 0.44 0.0585 0.5552 0.3248
LGXSM33 m 0.392 0.074 0.5378 0.2462
LGXSM35 f 0.345 0.0585 0.4602 0.2298
LGXSM35 m 0.249 0.0523 0.3521 0.1459
LGXSM39 f 0.493 0.0523 0.5961 0.3899
LGXSM39 m 0.4386 0.0625 0.5618 0.3154
LGXSM4 f 0.265 0.0585 0.3802 0.1498
LGXSM4 m 0.2212 0.0585 0.3365 0.106
LGXSM45 f 0.512 0.074 0.6578 0.3662
LGXSM45 m 0.3567 0.0955 0.5449 0.1685
LGXSM46 f 0.2867 0.0551 0.3953 0.178
LGXSM46 m 0.1918 0.0499 0.2901 0.0935
LGXSM48 f 0.358 0.0523 0.4611 0.2549
LGXSM48 m 0.2912 0.0585 0.4065 0.176
LGXSM5 f 0.3887 0.0585 0.504 0.2735
LGXSM5 m 0.3167 0.0675 0.4497 0.1836


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 0.585 0.0428 0.6693 0.5007
LGXSM15 both 0.3182 0.0372 0.3915 0.245
LGXSM18 both 0.316 0.0402 0.3952 0.2368
LGXSM19 both 0.342 0.0402 0.4212 0.2628
LGXSM20 both 0.3546 0.0428 0.4389 0.2702
LGXSM22 both 0.3081 0.0378 0.3825 0.2337
LGXSM23 both 0.345 0.0348 0.4136 0.2765
LGXSM31 both 0.4337 0.0632 0.5582 0.3093
LGXSM33 both 0.416 0.0472 0.5089 0.3231
LGXSM35 both 0.297 0.0392 0.3743 0.2197
LGXSM39 both 0.4658 0.0408 0.5461 0.3855
LGXSM4 both 0.2431 0.0414 0.3246 0.1616
LGXSM45 both 0.4343 0.0604 0.5534 0.3153
LGXSM46 both 0.2392 0.0372 0.3125 0.166
LGXSM48 both 0.3246 0.0392 0.4019 0.2473
LGXSM5 both 0.3527 0.0447 0.4407 0.2647




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA