Project measure / variable:   Gershenfeld1   defecation_Rx

ID, description, units MPD:16219   defecation_Rx   number of fecal boli, 15 min test   [n]  imipramine 30mg/kg  
imipramine study
Data set, strains Gershenfeld1   inbred   12 strains     sex: m     age: 5-10wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Gershenfeld1 - number of fecal boli, 15 min test imipramine 30mg/kg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested12 strains
Mean of the strain means5.41   n
Median of the strain means5.40   n
SD of the strain means± 2.33
Coefficient of variation (CV)0.431
Min–max range of strain means1.80   –   10.4   n
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 11 311.4912 28.3174 5.092 < 0.0001
Residuals 50 278.0571 5.5611


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 4.8 1.64   5 0.735 0.342 3.0, 7.0 -0.26
A/J m 5.8 1.48   5 0.663 0.256 4.0, 8.0 0.17
AKR/J m 6.0 1.41   5 0.632 0.236 5.0, 8.0 0.26
BALB/cJ m 6.2 3.11   5 1.39 0.502 3.0, 10.0 0.34
C3H/HeJ m 2.8 2.39   5 1.07 0.853 -1.12
C57BL/6J m 5.0 4.9   5 2.19 0.98 -0.17
Crl:NMRI(Han) m 10.4 2.51   5 1.12 0.241 8.0, 14.0 2.14
DBA/2J m 4.8 0.837   5 0.374 0.174 4.0, 6.0 -0.26
FVB/NJ m 7.4 2.97   5 1.33 0.401 4.0, 11.0 0.86
LP/J m 2.86 0.9   7 0.34 0.315 2.0, 4.0 -1.09
SENCARA/PtJ m 1.8 1.92   5 0.86 1.07 -1.55
SWR/J m 7.0 1.58   5 0.707 0.226 5.0, 9.0 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 4.8 1.0546 6.9183 2.6817
A/J m 5.8 1.0546 7.9183 3.6817
AKR/J m 6.0 1.0546 8.1183 3.8817
BALB/cJ m 6.2 1.0546 8.3183 4.0817
C3H/HeJ m 2.8 1.0546 4.9183 0.6817
C57BL/6J m 5.0 1.0546 7.1183 2.8817
Crl:NMRI(Han) m 10.4 1.0546 12.5183 8.2817
DBA/2J m 4.8 1.0546 6.9183 2.6817
FVB/NJ m 7.4 1.0546 9.5183 5.2817
LP/J m 2.8571 0.8913 4.6474 1.0669
SENCARA/PtJ m 1.8 1.0546 3.9183 0.0
SWR/J m 7.0 1.0546 9.1183 4.8817




  GWAS USING LINEAR MIXED MODELS