Project measure / variable:   Gershenfeld1   LDtransits

ID, description, units MPD:16210   LDtransits   number of transitions between light and dark compartments in 10 min   [n]  baseline  
imipramine study
Data set, strains Gershenfeld1   inbred   12 strains     sex: m     age: 5-10wks
Procedure light-dark box
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Gershenfeld1 - number of transitions between light and dark compartments in 10 min baseline



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested12 strains
Mean of the strain means24.3   n
Median of the strain means18.4   n
SD of the strain means± 20.2
Coefficient of variation (CV)0.832
Min–max range of strain means0.400   –   61.8   n
Mean sample size per strain4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 11 20874.2009 1897.6546 16.8563 < 0.0001
Residuals 47 5291.1889 112.5785


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 10.4 12.0   5 5.35 1.15 -0.69
A/J m 0.4 0.548   5 0.245 1.37 -1.18
AKR/J m 28.0 8.28   5 3.7 0.296 16.0, 36.0 0.18
BALB/cJ m 3.4 4.72   5 2.11 1.39 -1.03
C3H/HeJ m 21.6 5.5   5 2.46 0.255 14.0, 29.0 -0.14
C57BL/6J m 49.4 10.1   5 4.51 0.204 36.0, 63.0 1.24
Crl:NMRI(Han) m 61.8 8.02   4 4.01 0.13 56.0, 73.0 1.85
DBA/2J m 12.0 4.24   2   3.0 0.354 9.0, 15.0 -0.61
FVB/NJ m 54.0 12.6   5 5.63 0.233 32.0, 64.0 1.46
LP/J m 15.1 18.6   9 6.21 1.23 -0.46
SENCARA/PtJ m 12.8 6.85   4 3.42 0.537 5.0, 19.0 -0.57
SWR/J m 23.2 3.83   5 1.71 0.165 17.0, 26.0 -0.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 10.4 4.7451 19.9459 0.8541
A/J m 0.4 4.7451 9.9459 0.0
AKR/J m 28.0 4.7451 37.5459 18.4541
BALB/cJ m 3.4 4.7451 12.9459 0.0
C3H/HeJ m 21.6 4.7451 31.1459 12.0541
C57BL/6J m 49.4 4.7451 58.9459 39.8541
Crl:NMRI(Han) m 61.75 5.3052 72.4226 51.0774
DBA/2J m 12.0 7.5026 27.0933 0.0
FVB/NJ m 54.0 4.7451 63.5459 44.4541
LP/J m 15.1111 3.5368 22.2262 7.9961
SENCARA/PtJ m 12.75 5.3052 23.4226 2.0774
SWR/J m 23.2 4.7451 32.7459 13.6541




  GWAS USING LINEAR MIXED MODELS