Project measure / variable:   Gershenfeld1   TST_pre_saline

ID, description, units MPD:16201   TST_pre_saline   TST duration of immobility, effect of saline injection on control group, 6 min test   [s]  before injection  
Data set, strains Gershenfeld1   inbred   12 strains     sex: m     age: 5-10wks
Procedure tail suspension test
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  STRAIN COMPARISON PLOT
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Gershenfeld1 - TST duration of immobility, effect of saline injection on control group, 6 min test before injection



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested12 strains
Mean of the strain means227   s
Median of the strain means234   s
SD of the strain means± 22.6
Coefficient of variation (CV)0.0997
Min–max range of strain means186   –   255   s
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 11 27562.539 2505.6854 1.87 0.0672
Residuals 49 65657.2643 1339.9442


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 244.0 25.5   5 11.4 0.105 210.0, 274.0 0.75
A/J m 214.0 28.3   5 12.7 0.132 187.0, 252.0 -0.57
AKR/J m 186.0 58.7   5 26.2 0.316 85.0, 237.0 -1.81
BALB/cJ m 247.0 24.3   5 10.9 0.0986 215.0, 265.0 0.89
C3H/HeJ m 255.0 48.4   5 21.6 0.19 196.0, 318.0 1.24
C57BL/6J m 236.0 64.6   5 28.9 0.273 125.0, 294.0 0.4
Crl:NMRI(Han) m 199.0 13.1   5 5.87 0.0658 180.0, 216.0 -1.23
DBA/2J m 202.0 17.5   5 7.84 0.087 181.0, 227.0 -1.1
FVB/NJ m 231.0 23.8   5 10.7 0.103 207.0, 267.0 0.18
LP/J m 236.0 36.1   7 13.7 0.153 184.0, 299.0 0.4
SENCARA/PtJ m 253.0 22.2   4 11.1 0.0877 234.0, 280.0 1.15
SWR/J m 220.0 32.1   5 14.3 0.146 182.0, 254.0 -0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 243.6 16.3704 276.4975 210.7025
A/J m 214.2 16.3704 247.0975 181.3025
AKR/J m 185.8 16.3704 218.6975 152.9025
BALB/cJ m 246.8 16.3704 279.6975 213.9025
C3H/HeJ m 254.8 16.3704 287.6975 221.9025
C57BL/6J m 236.4 16.3704 269.2975 203.5025
Crl:NMRI(Han) m 199.4 16.3704 232.2975 166.5025
DBA/2J m 201.6 16.3704 234.4975 168.7025
FVB/NJ m 231.0 16.3704 263.8975 198.1025
LP/J m 235.5714 13.8355 263.3749 207.768
SENCARA/PtJ m 253.25 18.3026 290.0305 216.4695
SWR/J m 220.2 16.3704 253.0975 187.3025




  GWAS USING LINEAR MIXED MODELS