Phenotype measure:   Wahlsten2   nflee

ID, description, units MPD:16003   nflee   number of tests with escapes   [score]
Data set, strains Wahlsten2   inbred   21 strains     sex: both     age: 10-12wks
Procedure behavior observation
Ontology mappings


  STRAIN COMPARISON PLOT
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Wahlsten2 - number of tests with escapes



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested21 strains20 strains
Mean of the strain means0.746   score 0.249   score
Median of the strain means0.100   score 0.0917   score
SD of the strain means± 1.40 ± 0.404
Coefficient of variation (CV)1.88 1.62
Min–max range of strain means0   –   5.60   score 0   –   1.50   score
Mean sample size per strain9.6   mice 9.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.6485 6.6485 8.9813 0.0029
strain 19 148.8697 7.8352 10.5844 < 0.0001
sex:strain 19 30.281 1.5937 2.1529 0.0037
Residuals 346 256.1308 0.7403


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.1 0.316   10 0.1 3.16 0.0, 1.0 -0.46
129S1/SvImJ m 0.0 0.0   10 0.0 0.0 0.0, 0.0 -0.62
A/J f 0.0 0.0   8 0.0 0.0 0.0, 0.0 -0.53
A/J m 0.0 0.0   10 0.0 0.0 0.0, 0.0 -0.62
AKR/J f 0.222 0.441   9 0.147 1.98 0.0, 1.0 -0.37
AKR/J m 0.0 0.0   8 0.0 0.0 0.0, 0.0 -0.62
BALB/cByJ f 0.0 0.0   10 0.0 0.0 0.0, 0.0 -0.53
BALB/cByJ m 0.0 0.0   10 0.0 0.0 0.0, 0.0 -0.62
BTBR T+ Itpr3tf/J f 0.583 0.793   12 0.229 1.36 0.0, 2.0 -0.12
BTBR T+ Itpr3tf/J m 1.0 1.1   6 0.447 1.1 0.0, 3.0 1.86
C3H/HeJ f 0.1 0.316   10 0.1 3.16 0.0, 1.0 -0.46
C3H/HeJ m 0.0 0.0   8 0.0 0.0 0.0, 0.0 -0.62
C57BL/6J f 0.0 0.0   8 0.0 0.0 0.0, 0.0 -0.53
C57BL/6J m 0.1 0.316   10 0.1 3.16 0.0, 1.0 -0.37
C57L/J f 0.1 0.316   10 0.1 3.16 0.0, 1.0 -0.46
C57L/J m 0.0 0.0   8 0.0 0.0 0.0, 0.0 -0.62
C58/J f 0.667 1.0   9 0.333 1.5 0.0, 3.0 -0.06
C58/J m 0.2 0.422   10 0.133 2.11 0.0, 1.0 -0.12
CAST/EiJ f 1.5 1.84   10 0.582 1.23 0.0, 5.0 0.54
CAST/EiJ m 0.778 1.3   9 0.434 1.67 0.0, 4.0 1.31
DBA/2J f 0.1 0.316   10 0.1 3.16 0.0, 1.0 -0.46
DBA/2J m 0.0 0.0   8 0.0 0.0 0.0, 0.0 -0.62
FVB/NJ f 0.1 0.316   10 0.1 3.16 0.0, 1.0 -0.46
FVB/NJ m 0.182 0.405   11 0.122 2.22 0.0, 1.0 -0.17
MOLF/EiJ f 0.5 0.756   8 0.267 1.51 0.0, 2.0 -0.17
MOLF/EiJ m 0.167 0.408   6 0.167 2.45 0.0, 1.0 -0.2
NOD/ShiLtJ f 1.42 1.31   12 0.379 0.926 0.0, 4.0 0.48
NOD/ShiLtJ m 0.5 1.73   12 0.5 3.46 0.0, 6.0 0.62
NZB/BlNJ f 0.167 0.408   6 0.167 2.45 0.0, 1.0 -0.41
NZB/BlNJ m 0.167 0.389   12 0.112 2.34 0.0, 1.0 -0.2
PERA/EiJ f 3.7 2.67   10 0.844 0.721 0.0, 8.0 2.1
PERA/EiJ m 1.5 1.93   12 0.557 1.29 0.0, 5.0 3.1
PL/J f 0.0 0.0   12 0.0 0.0 0.0, 0.0 -0.53
PL/J m 0.0 0.0   8 0.0 0.0 0.0, 0.0 -0.62
SJL/J f 0.0 0.0   8 0.0 0.0 0.0, 0.0 -0.53
SJL/J m 0.0833 0.289   12 0.0833 3.46 0.0, 1.0 -0.41
SM/J f 0.0 0.0   14 0.0 0.0 0.0, 0.0 -0.53
SM/J m 0.0 0.0   10 0.0 0.0 0.0, 0.0 -0.62
SPRET/EiJ f 5.6 2.88   5 1.29 0.514 2.0, 9.0 3.46
SWR/J f 0.8 1.23   10 0.389 1.54 0.0, 4.0 0.04
SWR/J m 0.3 0.483   10 0.153 1.61 0.0, 1.0 0.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.1 0.2721 0.6351 -0.4351
129S1/SvImJ m 0.0 0.2721 0.5351 -0.5351
A/J f 0.0 0.3042 0.5983 -0.5983
A/J m 0.0 0.2721 0.5351 -0.5351
AKR/J f 0.2222 0.2868 0.7863 -0.3419
AKR/J m 0.0 0.3042 0.5983 -0.5983
BALB/cByJ f 0.0 0.2721 0.5351 -0.5351
BALB/cByJ m 0.0 0.2721 0.5351 -0.5351
BTBR T+ Itpr3tf/J f 0.5833 0.2484 1.0718 0.0948
BTBR T+ Itpr3tf/J m 1.0 0.3513 1.6909 0.3091
C3H/HeJ f 0.1 0.2721 0.6351 -0.4351
C3H/HeJ m 0.0 0.3042 0.5983 -0.5983
C57BL/6J f 0.0 0.3042 0.5983 -0.5983
C57BL/6J m 0.1 0.2721 0.6351 -0.4351
C57L/J f 0.1 0.2721 0.6351 -0.4351
C57L/J m 0.0 0.3042 0.5983 -0.5983
C58/J f 0.6667 0.2868 1.2307 0.1026
C58/J m 0.2 0.2721 0.7351 -0.3351
CAST/EiJ f 1.5 0.2721 2.0351 0.9649
CAST/EiJ m 0.7778 0.2868 1.3419 0.2137
DBA/2J f 0.1 0.2721 0.6351 -0.4351
DBA/2J m 0.0 0.3042 0.5983 -0.5983
FVB/NJ f 0.1 0.2721 0.6351 -0.4351
FVB/NJ m 0.1818 0.2594 0.692 -0.3284
MOLF/EiJ f 0.5 0.3042 1.0983 -0.0983
MOLF/EiJ m 0.1667 0.3513 0.8575 -0.5242
NOD/ShiLtJ f 1.4167 0.2484 1.9052 0.9282
NOD/ShiLtJ m 0.5 0.2484 0.9885 0.0115
NZB/BlNJ f 0.1667 0.3513 0.8575 -0.5242
NZB/BlNJ m 0.1667 0.2484 0.6552 -0.3218
PERA/EiJ f 3.7 0.2721 4.2351 3.1649
PERA/EiJ m 1.5 0.2484 1.9885 1.0115
PL/J f 0.0 0.2484 0.4885 -0.4885
PL/J m 0.0 0.3042 0.5983 -0.5983
SJL/J f 0.0 0.3042 0.5983 -0.5983
SJL/J m 0.0833 0.2484 0.5718 -0.4052
SM/J f 0.0 0.2299 0.4523 -0.4523
SM/J m 0.0 0.2721 0.5351 -0.5351
SWR/J f 0.8 0.2721 1.3351 0.2649
SWR/J m 0.3 0.2721 0.8351 -0.2351


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.05 0.1924 0.4284 -0.3284
A/J both 0.0 0.2041 0.4014 -0.4014
AKR/J both 0.1111 0.209 0.5223 -0.3
BALB/cByJ both 0.0 0.1924 0.3784 -0.3784
BTBR T+ Itpr3tf/J both 0.7917 0.2151 1.2147 0.3686
C3H/HeJ both 0.05 0.2041 0.4514 -0.3514
C57BL/6J both 0.05 0.2041 0.4514 -0.3514
C57L/J both 0.05 0.2041 0.4514 -0.3514
C58/J both 0.4333 0.1977 0.8221 0.0446
CAST/EiJ both 1.1389 0.1977 1.5277 0.7501
DBA/2J both 0.05 0.2041 0.4514 -0.3514
FVB/NJ both 0.1409 0.188 0.5106 -0.2288
MOLF/EiJ both 0.3333 0.2323 0.7903 -0.1236
NOD/ShiLtJ both 0.9583 0.1756 1.3038 0.6129
NZB/BlNJ both 0.1667 0.2151 0.5897 -0.2564
PERA/EiJ both 2.6 0.1842 2.9623 2.2377
PL/J both 0.0 0.1964 0.3862 -0.3862
SJL/J both 0.0417 0.1964 0.4279 -0.3445
SM/J both 0.0 0.1781 0.3503 -0.3503
SWR/J both 0.55 0.1924 0.9284 0.1716




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.