Project measure / variable:   Wahlsten2   nbite

ID, description, units MPD:16002   nbite   number of tests with bites   [score]  
Data set, strains Wahlsten2   inbred   21 strains     sex: both     age: 10-12wks
Procedure behavior observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Wahlsten2 - number of tests with bites



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested21 strains20 strains
Mean of the strain means0.344   score 0.227   score
Median of the strain means0.0714   score 0.0871   score
SD of the strain means± 0.608 ± 0.421
Coefficient of variation (CV)1.77 1.85
Min–max range of strain means0   –   2.60   score 0   –   1.70   score
Mean sample size per strain9.6   mice 9.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.018 0.018 0.0562 0.8128
strain 19 41.0623 2.1612 6.7619 < 0.0001
sex:strain 19 10.2727 0.5407 1.6917 0.0357
Residuals 346 110.5849 0.3196


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   10 0.0 0.0 -0.57
129S1/SvImJ m 0.1 0.316   10 0.1 3.16 -0.3
A/J f 0.0 0.0   8 0.0 0.0 -0.57
A/J m 0.0 0.0   10 0.0 0.0 -0.54
AKR/J f 0.0 0.0   9 0.0 0.0 -0.57
AKR/J m 0.125 0.354   8 0.125 2.83 -0.24
BALB/cByJ f 0.0 0.0   10 0.0 0.0 -0.57
BALB/cByJ m 0.0 0.0   10 0.0 0.0 -0.54
BTBR T+ Itpr3tf/J f 0.167 0.389   12 0.112 2.34 -0.29
BTBR T+ Itpr3tf/J m 0.0 0.0   6 0.0 0.0 -0.54
C3H/HeJ f 0.0 0.0   10 0.0 0.0 -0.57
C3H/HeJ m 0.0 0.0   8 0.0 0.0 -0.54
C57BL/6J f 0.25 0.707   8 0.25 2.83 -0.15
C57BL/6J m 0.4 0.516   10 0.163 1.29 0.41
C57L/J f 0.0 0.0   10 0.0 0.0 -0.57
C57L/J m 0.0 0.0   8 0.0 0.0 -0.54
C58/J f 0.556 1.01   9 0.338 1.82 0.35
C58/J m 0.0 0.0   10 0.0 0.0 -0.54
CAST/EiJ f 0.3 0.483   10 0.153 1.61 -0.07
CAST/EiJ m 0.333 1.0   9 0.333 3.0 0.25
DBA/2J f 0.1 0.316   10 0.1 3.16 -0.4
DBA/2J m 0.125 0.354   8 0.125 2.83 -0.24
FVB/NJ f 0.0 0.0   10 0.0 0.0 -0.57
FVB/NJ m 0.0909 0.302   11 0.0909 3.32 -0.32
MOLF/EiJ f 0.875 1.13   8 0.398 1.29 0.87
MOLF/EiJ m 1.0 0.632   6 0.258 0.632 1.84
NOD/ShiLtJ f 1.0 1.48   12 0.426 1.48 1.08
NOD/ShiLtJ m 0.333 0.492   12 0.142 1.48 0.25
NZB/BlNJ f 0.0 0.0   6 0.0 0.0 -0.57
NZB/BlNJ m 0.0 0.0   12 0.0 0.0 -0.54
PERA/EiJ f 0.6 0.699   10 0.221 1.17 0.42
PERA/EiJ m 0.25 0.622   12 0.179 2.49 0.05
PL/J f 0.0 0.0   12 0.0 0.0 -0.57
PL/J m 0.0 0.0   8 0.0 0.0 -0.54
SJL/J f 0.0 0.0   8 0.0 0.0 -0.57
SJL/J m 0.0833 0.289   12 0.0833 3.46 -0.34
SM/J f 0.0714 0.267   14 0.0714 3.74 -0.45
SM/J m 0.0 0.0   10 0.0 0.0 -0.54
SPRET/EiJ f 2.6 1.52   5 0.678 0.583 1.0, 4.0 3.71
SWR/J f 0.7 1.06   10 0.335 1.51 0.59
SWR/J m 1.7 1.57   10 0.496 0.922 3.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 0.1788 0.3516 -0.3516
129S1/SvImJ m 0.1 0.1788 0.4516 -0.2516
A/J f 0.0 0.1999 0.3931 -0.3931
A/J m 0.0 0.1788 0.3516 -0.3516
AKR/J f 0.0 0.1884 0.3706 -0.3706
AKR/J m 0.125 0.1999 0.5181 -0.2681
BALB/cByJ f 0.0 0.1788 0.3516 -0.3516
BALB/cByJ m 0.0 0.1788 0.3516 -0.3516
BTBR T+ Itpr3tf/J f 0.1667 0.1632 0.4877 -0.1543
BTBR T+ Itpr3tf/J m 0.0 0.2308 0.4539 -0.4539
C3H/HeJ f 0.0 0.1788 0.3516 -0.3516
C3H/HeJ m 0.0 0.1999 0.3931 -0.3931
C57BL/6J f 0.25 0.1999 0.6431 -0.1431
C57BL/6J m 0.4 0.1788 0.7516 0.0484
C57L/J f 0.0 0.1788 0.3516 -0.3516
C57L/J m 0.0 0.1999 0.3931 -0.3931
C58/J f 0.5556 0.1884 0.9262 0.1849
C58/J m 0.0 0.1788 0.3516 -0.3516
CAST/EiJ f 0.3 0.1788 0.6516 -0.0516
CAST/EiJ m 0.3333 0.1884 0.704 -0.0373
DBA/2J f 0.1 0.1788 0.4516 -0.2516
DBA/2J m 0.125 0.1999 0.5181 -0.2681
FVB/NJ f 0.0 0.1788 0.3516 -0.3516
FVB/NJ m 0.0909 0.1705 0.4262 -0.2444
MOLF/EiJ f 0.875 0.1999 1.2681 0.4819
MOLF/EiJ m 1.0 0.2308 1.4539 0.5461
NOD/ShiLtJ f 1.0 0.1632 1.321 0.679
NOD/ShiLtJ m 0.3333 0.1632 0.6543 0.0123
NZB/BlNJ f 0.0 0.2308 0.4539 -0.4539
NZB/BlNJ m 0.0 0.1632 0.321 -0.321
PERA/EiJ f 0.6 0.1788 0.9516 0.2484
PERA/EiJ m 0.25 0.1632 0.571 -0.071
PL/J f 0.0 0.1632 0.321 -0.321
PL/J m 0.0 0.1999 0.3931 -0.3931
SJL/J f 0.0 0.1999 0.3931 -0.3931
SJL/J m 0.0833 0.1632 0.4043 -0.2377
SM/J f 0.0714 0.1511 0.3686 -0.2257
SM/J m 0.0 0.1788 0.3516 -0.3516
SWR/J f 0.7 0.1788 1.0516 0.3484
SWR/J m 1.7 0.1788 2.0516 1.3484


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.05 0.1264 0.2986 -0.1986
A/J both 0.0 0.1341 0.2637 -0.2637
AKR/J both 0.0625 0.1374 0.3327 -0.2077
BALB/cByJ both 0.0 0.1264 0.2486 -0.2486
BTBR T+ Itpr3tf/J both 0.0833 0.1413 0.3613 -0.1947
C3H/HeJ both 0.0 0.1341 0.2637 -0.2637
C57BL/6J both 0.325 0.1341 0.5887 0.0613
C57L/J both 0.0 0.1341 0.2637 -0.2637
C58/J both 0.2778 0.1299 0.5332 0.0223
CAST/EiJ both 0.3167 0.1299 0.5721 0.0612
DBA/2J both 0.1125 0.1341 0.3762 -0.1512
FVB/NJ both 0.0455 0.1235 0.2884 -0.1975
MOLF/EiJ both 0.9375 0.1527 1.2378 0.6372
NOD/ShiLtJ both 0.6667 0.1154 0.8936 0.4397
NZB/BlNJ both 0.0 0.1413 0.278 -0.278
PERA/EiJ both 0.425 0.121 0.6631 0.1869
PL/J both 0.0 0.129 0.2538 -0.2538
SJL/J both 0.0417 0.129 0.2954 -0.2121
SM/J both 0.0357 0.117 0.2659 -0.1945
SWR/J both 1.2 0.1264 1.4486 0.9514




  GWAS USING LINEAR MIXED MODELS