Project measure / variable:   Jaxwest1   bw

ID, description, units MPD:15125   bw   body weight   [g]  
Data set, strains Jaxwest1   inbred   7 strains     sex: both     age: 11-13wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Jaxwest1 - body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains7 strains
Mean of the strain means22.0   g 28.0   g
Median of the strain means21.4   g 28.3   g
SD of the strain means± 2.57 ± 2.59
Coefficient of variation (CV)0.117 0.0926
Min–max range of strain means19.4   –   26.6   g 24.9   –   32.0   g
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 997.2289 997.2289 240.3597 < 0.0001
strain 6 567.8634 94.6439 22.8118 < 0.0001
sex:strain 6 79.4723 13.2454 3.1925 0.0066
Residuals 98 406.5925 4.1489


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 19.5 0.84   8 0.297 0.043 18.2, 20.7 -0.99
129S1/SvImJ m 24.9 2.36   8 0.833 0.0948 20.6, 27.9 -1.21
A/J f 21.4 2.58   8 0.912 0.121 17.6, 25.3 -0.25
A/J m 25.8 1.6   8 0.565 0.0619 24.6, 29.2 -0.86
BALB/cJ f 22.9 1.4   8 0.494 0.0611 21.5, 25.9 0.33
BALB/cJ m 29.6 2.31   8 0.817 0.0782 27.0, 33.7 0.61
C57BL/6J f 20.8 1.96   8 0.692 0.0941 17.6, 23.5 -0.48
C57BL/6J m 28.3 2.57   8 0.907 0.0907 26.1, 33.3 0.1
DBA/2J f 26.6 3.19   8 1.13 0.12 23.0, 32.5 1.77
DBA/2J m 29.7 2.62   8 0.927 0.0884 27.3, 35.8 0.64
NOD/ShiLtJ f 23.7 1.18   8 0.417 0.0496 22.2, 26.0 0.64
NOD/ShiLtJ m 32.0 1.79   8 0.634 0.0559 29.5, 35.0 1.53
SJL/J f 19.4 1.05   8 0.37 0.054 18.5, 21.5 -1.03
SJL/J m 25.9 1.46   8 0.517 0.0566 23.9, 27.9 -0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 19.525 0.7201 20.9541 18.0959
129S1/SvImJ m 24.85 0.7201 26.2791 23.4209
A/J f 21.4125 0.7201 22.8416 19.9834
A/J m 25.825 0.7201 27.2541 24.3959
BALB/cJ f 22.8875 0.7201 24.3166 21.4584
BALB/cJ m 29.575 0.7201 31.0041 28.1459
C57BL/6J f 20.7875 0.7201 22.2166 19.3584
C57BL/6J m 28.275 0.7201 29.7041 26.8459
DBA/2J f 26.625 0.7201 28.0541 25.1959
DBA/2J m 29.6875 0.7201 31.1166 28.2584
NOD/ShiLtJ f 23.7375 0.7201 25.1666 22.3084
NOD/ShiLtJ m 32.05 0.7201 33.4791 30.6209
SJL/J f 19.3875 0.7201 20.8166 17.9584
SJL/J m 25.875 0.7201 27.3041 24.4459


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 22.1875 0.5092 23.198 21.177
A/J both 23.6187 0.5092 24.6293 22.6082
BALB/cJ both 26.2312 0.5092 27.2418 25.2207
C57BL/6J both 24.5312 0.5092 25.5418 23.5207
DBA/2J both 28.1562 0.5092 29.1668 27.1457
NOD/ShiLtJ both 27.8937 0.5092 28.9043 26.8832
SJL/J both 22.6312 0.5092 23.6418 21.6207




  GWAS USING LINEAR MIXED MODELS