Phenotype measure:   Richfield1   5HT

ID, description, units MPD:14525   5HT   serotonin (5HT), ng per mg total protein   [ratio]
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure neurotransmitter quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Richfield1 - serotonin (5HT), ng per mg total protein



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means10.3   ratio
Median of the strain means11.0   ratio
SD of the strain means± 2.33
Coefficient of variation (CV)0.226
Min–max range of strain means6.24   –   14.1   ratio
Mean sample size per strain9.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 808.1229 57.7231 3.2296 0.0002
Residuals 143 2555.8715 17.8732


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 14.1 6.15   10 1.95 0.436 9.2, 28.5 1.62
A/HeJ m 7.53 3.31   10 1.05 0.44 4.6, 14.4 -1.2
A/J m 13.1 5.73   10 1.81 0.437 5.8, 21.4 1.19
AKR/J m 11.0 4.97   10 1.57 0.452 6.8, 20.8 0.29
B10.D2-Hc0 m 12.3 7.13   10 2.25 0.581 6.7, 26.9 0.85
BALB/cByJ m 9.33 3.18   9 1.06 0.34 6.5, 16.8 -0.42
BALB/cJ m 9.34 2.93   10 0.928 0.314 5.2, 14.9 -0.42
C3H/HeJ m 11.7 4.84   10 1.53 0.416 6.8, 21.7 0.59
C57BL/6J m 7.88 3.16   20 0.707 0.401 3.5, 16.3 -1.05
CAST/EiJ m 6.24 1.58   10 0.499 0.253 4.4, 9.0 -1.75
DBA/2J m 9.94 3.03   10 0.958 0.305 6.5, 14.2 -0.16
MRL/MpJ m 11.3 4.57   10 1.45 0.403 5.5, 20.0 0.42
NZB/BlNJ m 7.38 2.73   10 0.864 0.37 3.7, 12.3 -1.26
NZW/LacJ m 11.0 3.92   10 1.24 0.355 7.1, 19.2 0.29
SPRET/EiJ m 12.6 3.23   9 1.08 0.257 8.6, 19.0 0.98


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 14.12 1.3369 16.7627 11.4773
A/HeJ m 7.53 1.3369 10.1727 4.8873
A/J m 13.09 1.3369 15.7327 10.4473
AKR/J m 11.01 1.3369 13.6527 8.3673
B10.D2-Hc0 m 12.27 1.3369 14.9127 9.6273
BALB/cByJ m 9.3333 1.4092 12.1189 6.5477
BALB/cJ m 9.34 1.3369 11.9827 6.6973
C3H/HeJ m 11.65 1.3369 14.2927 9.0073
C57BL/6J m 7.875 0.9453 9.7436 6.0064
CAST/EiJ m 6.24 1.3369 8.8827 3.5973
DBA/2J m 9.94 1.3369 12.5827 7.2973
MRL/MpJ m 11.34 1.3369 13.9827 8.6973
NZB/BlNJ m 7.38 1.3369 10.0227 4.7373
NZW/LacJ m 11.03 1.3369 13.6727 8.3873
SPRET/EiJ m 12.5667 1.4092 15.3523 9.7811




  GWAS USING LINEAR MIXED MODELS