Phenotype measure:   Naggert1   GLU_fat17

ID, description, units MPD:14303   GLU_fat17   glucose (plasma GLU, 4h fast)   [mg/dL]  after 17wks on diet
high-fat diet study
Data set, strains Naggert1   inbred w/CC7   42 strains     sex: both     age: 7-9wks
Procedure metabolic panel
Ontology mappings

  STRAIN COMPARISON PLOT
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Naggert1 - glucose (plasma GLU, 4h fast) after 17wks on diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested42 strains39 strains
Mean of the strain means149   mg/dL 164   mg/dL
Median of the strain means148   mg/dL 160   mg/dL
SD of the strain means± 31.9 ± 44.8
Coefficient of variation (CV)0.214 0.274
Min–max range of strain means85.2   –   266   mg/dL 81.7   –   348   mg/dL
Mean sample size per strain8.9   mice 8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 38310.9434 38310.9434 19.2191 < 0.0001
strain 38 634346.439 16693.3273 8.3744 < 0.0001
sex:strain 38 224211.9975 5900.3157 2.96 < 0.0001
Residuals 600 1196025.1231 1993.3752


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 114.0 15.5   10 4.9 0.135 91.0, 142.0 -1.1
129S1/SvImJ m 140.0 22.3   9 7.42 0.159 89.0, 158.0 -0.53
A/J f 86.7 11.9   10 3.76 0.137 69.0, 110.0 -1.96
A/J m 81.7 28.4   9 9.47 0.348 13.0, 112.0 -1.83
AKR/J f 142.0 36.6   12 10.6 0.259 49.0, 186.0 -0.23
BALB/cByJ f 137.0 20.4   11 6.15 0.149 113.0, 176.0 -0.38
BALB/cByJ m 136.0 35.2   8 12.4 0.259 88.0, 205.0 -0.62
BALB/cJ f 106.0 17.1   9 5.68 0.16 89.0, 141.0 -1.35
BALB/cJ m 124.0 11.1   10 3.51 0.0895 114.0, 146.0 -0.89
BTBR T+ Itpr3tf/J f 167.0 23.6   8 8.34 0.141 142.0, 202.0 0.56
BTBR T+ Itpr3tf/J m 168.0 24.3   7 9.19 0.144 145.0, 211.0 0.1
BUB/BnJ f 168.0 33.5   10 10.6 0.2 126.0, 220.0 0.59
BUB/BnJ m 166.0 10.5   5 4.68 0.063 151.0, 176.0 0.05
C3H/HeJ f 154.0 16.5   10 5.23 0.107 130.0, 180.0 0.15
C3H/HeJ m 171.0 36.0   8 12.7 0.211 122.0, 242.0 0.16
C57BL/10J f 196.0 34.1   9 11.4 0.173 146.0, 249.0 1.47
C57BL/10J m 174.0 36.6   10 11.6 0.21 115.0, 244.0 0.23
C57BL/6J f 190.0 24.0   10 7.59 0.127 140.0, 216.0 1.28
C57BL/6J m 199.0 31.5   10 9.97 0.159 150.0, 245.0 0.79
C57BLKS/J f 144.0 21.8   9 7.28 0.152 101.0, 177.0 -0.16
C57BLKS/J m 157.0 30.1   10 9.51 0.191 107.0, 194.0 -0.15
C57BR/cdJ f 173.0 23.6   10 7.48 0.137 144.0, 224.0 0.75
C57BR/cdJ m 177.0 28.9   10 9.14 0.163 137.0, 234.0 0.3
C57L/J f 153.0 20.0   10 6.33 0.131 125.0, 192.0 0.12
C57L/J m 191.0 20.5   10 6.5 0.107 157.0, 224.0 0.61
C58/J f 85.2 8.61   5 3.85 0.101 74.0, 97.0 -2.0
C58/J m 107.0 13.2   7 4.98 0.124 88.0, 125.0 -1.26
CAST/EiJ f 147.0 24.7   9 8.23 0.168 121.0, 181.0 -0.07
CAST/EiJ m 160.0 34.2   8 12.1 0.214 113.0, 207.0 -0.08
CBA/J f 185.0 36.5   8 12.9 0.197 133.0, 261.0 1.12
CBA/J m 195.0 24.0   8 8.5 0.123 147.0, 219.0 0.7
CZECHII/EiJ f 122.0 59.1   11 17.8 0.486 28.0, 213.0 -0.85
CZECHII/EiJ m 142.0 59.7   9 19.9 0.42 62.0, 250.0 -0.48
DBA/1J f 141.0 4.53   7 1.71 0.0321 133.0, 146.0 -0.26
DBA/1J m 145.0 37.2   8 13.1 0.257 71.0, 186.0 -0.42
DBA/2J f 169.0 14.8   9 4.93 0.0876 152.0, 189.0 0.62
DBA/2J m 173.0 24.7   9 8.22 0.143 138.0, 208.0 0.21
FVB/NJ f 175.0 25.6   8 9.05 0.146 141.0, 212.0 0.81
FVB/NJ m 153.0 22.3   6 9.12 0.146 115.0, 175.0 -0.24
I/LnJ f 152.0 21.6   10 6.82 0.142 118.0, 191.0 0.09
I/LnJ m 187.0 23.0   9 7.66 0.123 144.0, 218.0 0.52
JF1/MsJ f 154.0 30.0   10 9.48 0.194 98.0, 203.0 0.15
JF1/MsJ m 157.0 25.3   7 9.56 0.161 126.0, 197.0 -0.15
KK/HlJ f 179.0 18.2   7 6.9 0.102 164.0, 217.0 0.93
LP/J f 158.0 28.7   10 9.08 0.182 107.0, 207.0 0.28
LP/J m 160.0 19.7   12 5.69 0.123 124.0, 192.0 -0.08
MA/MyJ f 136.0 33.3   10 10.5 0.244 86.0, 203.0 -0.41
MA/MyJ m 138.0 25.2   10 7.98 0.182 94.0, 186.0 -0.57
MOLF/EiJ f 107.0 16.3   7 6.16 0.152 85.0, 133.0 -1.32
MOLF/EiJ m 102.0 27.7   9 9.25 0.273 66.0, 153.0 -1.38
MSM/MsJ f 191.0 32.1   8 11.4 0.168 160.0, 252.0 1.31
MSM/MsJ m 216.0 41.2   11 12.4 0.19 157.0, 309.0 1.17
NOD/ShiLtJ f 148.0 71.6   7 27.1 0.485 93.0, 304.0 -0.04
NOD/ShiLtJ m 348.0 237.0   6 96.7 0.68 113.0, 623.0 4.12
NON/ShiLtJ f 121.0 40.6   10 12.8 0.335 63.0, 192.0 -0.88
NON/ShiLtJ m 232.0 182.0   12 52.4 0.782 100.0, 649.0 1.53
NZB/BlNJ f 159.0 57.6   12 16.6 0.362 109.0, 326.0 0.31
NZB/BlNJ m 150.0 25.1   9 8.38 0.168 112.0, 183.0 -0.3
NZW/LacJ f 146.0 7.9   9 2.63 0.054 137.0, 162.0 -0.1
NZW/LacJ m 168.0 18.0   8 6.35 0.107 132.0, 195.0 0.1
PERA/EiJ f 123.0 29.3   9 9.76 0.238 59.0, 154.0 -0.82
PERA/EiJ m 124.0 24.4   8 8.64 0.198 92.0, 171.0 -0.89
PL/J f 163.0 38.6   10 12.2 0.236 126.0, 229.0 0.43
PL/J m 133.0 15.9   5 7.1 0.119 114.0, 155.0 -0.68
PWK/PhJ f 153.0 30.7   9 10.2 0.2 107.0, 199.0 0.12
PWK/PhJ m 165.0 24.5   8 8.68 0.149 131.0, 200.0 0.03
RF/J f 136.0 15.3   7 5.77 0.112 112.0, 156.0 -0.41
RIIIS/J f 129.0 20.8   6 8.5 0.161 95.0, 151.0 -0.63
RIIIS/J m 160.0 29.9   8 10.6 0.187 112.0, 192.0 -0.08
SEA/GnJ f 122.0 15.7   9 5.22 0.128 93.0, 137.0 -0.85
SEA/GnJ m 155.0 23.8   7 9.01 0.154 123.0, 197.0 -0.19
SJL/J f 159.0 20.9   9 6.98 0.132 116.0, 188.0 0.31
SJL/J m 150.0 45.8   12 13.2 0.305 45.0, 236.0 -0.3
SM/J f 143.0 31.9   8 11.3 0.223 102.0, 193.0 -0.19
SM/J m 198.0 41.5   9 13.8 0.21 121.0, 273.0 0.77
SPRET/EiJ f 266.0 22.5   4 11.3 0.0848 234.0, 287.0 3.66
SPRET/EiJ m 231.0 37.7   5 16.8 0.163 194.0, 290.0 1.5
SWR/J f 139.0 17.2   8 6.07 0.123 102.0, 156.0 -0.32
SWR/J m 144.0 32.8   7 12.4 0.229 96.0, 188.0 -0.44
WSB/EiJ f 127.0 54.7   8 19.3 0.43 65.0, 251.0 -0.69
WSB/EiJ m 105.0 27.3   9 9.1 0.26 66.0, 137.0 -1.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 114.5 14.1187 142.2281 86.7719
129S1/SvImJ m 140.1111 14.8824 169.3391 110.8832
A/J f 86.7 14.1187 114.4281 58.9719
A/J m 81.6667 14.8824 110.8946 52.4387
BALB/cByJ f 136.9091 13.4616 163.3468 110.4714
BALB/cByJ m 136.125 15.7852 167.1259 105.1241
BALB/cJ f 106.3333 14.8824 135.5613 77.1054
BALB/cJ m 124.0 14.1187 151.7281 96.2719
BTBR T+ Itpr3tf/J f 167.375 15.7852 198.3759 136.3741
BTBR T+ Itpr3tf/J m 168.2857 16.8751 201.4271 135.1443
BUB/BnJ f 168.0 14.1187 195.7281 140.2719
BUB/BnJ m 166.0 19.9668 205.2134 126.7866
C3H/HeJ f 154.1 14.1187 181.8281 126.3719
C3H/HeJ m 171.125 15.7852 202.1259 140.1241
C57BL/10J f 196.3333 14.8824 225.5613 167.1054
C57BL/10J m 174.1 14.1187 201.8281 146.3719
C57BL/6J f 189.5 14.1187 217.2281 161.7719
C57BL/6J m 198.8 14.1187 226.5281 171.0719
C57BLKS/J f 143.8889 14.8824 173.1168 114.6609
C57BLKS/J m 157.2 14.1187 184.9281 129.4719
C57BR/cdJ f 172.9 14.1187 200.6281 145.1719
C57BR/cdJ m 176.9 14.1187 204.6281 149.1719
C57L/J f 153.3 14.1187 181.0281 125.5719
C57L/J m 191.3 14.1187 219.0281 163.5719
C58/J f 85.2 19.9668 124.4134 45.9866
C58/J m 106.7143 16.8751 139.8557 73.5729
CAST/EiJ f 147.3333 14.8824 176.5613 118.1054
CAST/EiJ m 160.0 15.7852 191.0009 128.9991
CBA/J f 185.375 15.7852 216.3759 154.3741
CBA/J m 194.875 15.7852 225.8759 163.8741
CZECHII/EiJ f 121.5455 13.4616 147.9831 95.1078
CZECHII/EiJ m 142.0 14.8824 171.2279 112.7721
DBA/1J f 141.1429 16.8751 174.2842 108.0015
DBA/1J m 144.75 15.7852 175.7509 113.7491
DBA/2J f 168.7778 14.8824 198.0057 139.5498
DBA/2J m 172.6667 14.8824 201.8946 143.4387
FVB/NJ f 174.875 15.7852 205.8759 143.8741
FVB/NJ m 152.8333 18.2272 188.6301 117.0366
I/LnJ f 151.5 14.1187 179.2281 123.7719
I/LnJ m 187.4444 14.8824 216.6724 158.2165
JF1/MsJ f 154.4 14.1187 182.1281 126.6719
JF1/MsJ m 157.2857 16.8751 190.4271 124.1443
LP/J f 157.8 14.1187 185.5281 130.0719
LP/J m 159.75 12.8885 185.0621 134.4379
MA/MyJ f 136.5 14.1187 164.2281 108.7719
MA/MyJ m 138.5 14.1187 166.2281 110.7719
MOLF/EiJ f 107.1429 16.8751 140.2842 74.0015
MOLF/EiJ m 101.6667 14.8824 130.8946 72.4387
MSM/MsJ f 190.75 15.7852 221.7509 159.7491
MSM/MsJ m 216.3636 13.4616 242.8013 189.926
NOD/ShiLtJ f 147.5714 16.8751 180.7128 114.4301
NOD/ShiLtJ m 348.3333 18.2272 384.1301 312.5366
NON/ShiLtJ f 121.1 14.1187 148.8281 93.3719
NON/ShiLtJ m 232.1667 12.8885 257.4788 206.8545
NZB/BlNJ f 159.0833 12.8885 184.3955 133.7712
NZB/BlNJ m 149.8889 14.8824 179.1168 120.6609
NZW/LacJ f 146.2222 14.8824 175.4502 116.9943
NZW/LacJ m 168.375 15.7852 199.3759 137.3741
PERA/EiJ f 122.7778 14.8824 152.0057 93.5498
PERA/EiJ m 123.625 15.7852 154.6259 92.6241
PL/J f 163.1 14.1187 190.8281 135.3719
PL/J m 133.4 19.9668 172.6134 94.1866
PWK/PhJ f 153.4444 14.8824 182.6724 124.2165
PWK/PhJ m 164.625 15.7852 195.6259 133.6241
RIIIS/J f 129.1667 18.2272 164.9634 93.3699
RIIIS/J m 159.75 15.7852 190.7509 128.7491
SEA/GnJ f 122.3333 14.8824 151.5613 93.1054
SEA/GnJ m 155.1429 16.8751 188.2842 122.0015
SJL/J f 158.6667 14.8824 187.8946 129.4387
SJL/J m 150.1667 12.8885 175.4788 124.8545
SM/J f 143.375 15.7852 174.3759 112.3741
SM/J m 198.1111 14.8824 227.3391 168.8832
SPRET/EiJ f 265.75 22.3236 309.5919 221.9081
SPRET/EiJ m 230.6 19.9668 269.8134 191.3866
SWR/J f 139.25 15.7852 170.2509 108.2491
SWR/J m 143.5714 16.8751 176.7128 110.4301
WSB/EiJ f 127.25 15.7852 158.2509 96.2491
WSB/EiJ m 105.1111 14.8824 134.3391 75.8832


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 127.3056 10.257 147.4495 107.1616
A/J both 84.1833 10.257 104.3273 64.0394
BALB/cByJ both 136.517 10.3729 156.8886 116.1455
BALB/cJ both 115.1667 10.257 135.3106 95.0227
BTBR T+ Itpr3tf/J both 167.8304 11.5536 190.5207 145.14
BUB/BnJ both 167.0 12.2271 191.0132 142.9868
C3H/HeJ both 162.6125 10.589 183.4085 141.8165
C57BL/10J both 185.2167 10.257 205.3606 165.0727
C57BL/6J both 194.15 9.9834 213.7567 174.5433
C57BLKS/J both 150.5444 10.257 170.6884 130.4005
C57BR/cdJ both 174.9 9.9834 194.5067 155.2933
C57L/J both 172.3 9.9834 191.9067 152.6933
C58/J both 95.9571 13.0714 121.6283 70.2859
CAST/EiJ both 153.6667 10.8473 174.97 132.3633
CBA/J both 190.125 11.1618 212.046 168.204
CZECHII/EiJ both 131.7727 10.0337 151.4782 112.0672
DBA/1J both 142.9464 11.5536 165.6368 120.2561
DBA/2J both 170.7222 10.5235 191.3895 150.0549
FVB/NJ both 163.8542 12.0561 187.5315 140.1768
I/LnJ both 169.4722 10.257 189.6162 149.3283
JF1/MsJ both 155.8429 11.0012 177.4484 134.2373
LP/J both 158.775 9.5584 177.547 140.003
MA/MyJ both 137.5 9.9834 157.1067 117.8933
MOLF/EiJ both 104.4048 11.25 126.499 82.3105
MSM/MsJ both 203.5568 10.3729 223.9284 183.1852
NOD/ShiLtJ both 247.9524 12.4197 272.3438 223.561
NON/ShiLtJ both 176.6333 9.5584 195.4053 157.8613
NZB/BlNJ both 154.4861 9.8438 173.8186 135.1536
NZW/LacJ both 157.2986 10.8473 178.602 135.9953
PERA/EiJ both 123.2014 10.8473 144.5047 101.898
PL/J both 148.25 12.2271 172.2632 124.2368
PWK/PhJ both 159.0347 10.8473 180.3381 137.7314
RIIIS/J both 144.4583 12.0561 168.1357 120.781
SEA/GnJ both 138.7381 11.25 160.8323 116.6438
SJL/J both 154.4167 9.8438 173.7491 135.0842
SM/J both 170.7431 10.8473 192.0464 149.4397
SPRET/EiJ both 248.175 14.9751 277.5851 218.7649
SWR/J both 141.4107 11.5536 164.1011 118.7204
WSB/EiJ both 116.1806 10.8473 137.4839 94.8772




  GWAS USING LINEAR MIXED MODELS