Phenotype measure:   Naggert1   GLU

ID, description, units MPD:14302   GLU   glucose (plasma GLU, 4h fast)   [mg/dL]  baseline
high-fat diet study
Data set, strains Naggert1   inbred w/CC7   43 strains     sex: both     age: 7-9wks
Procedure metabolic panel
Ontology mappings

  STRAIN COMPARISON PLOT
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Naggert1 - glucose (plasma GLU, 4h fast) baseline



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested42 strains43 strains
Mean of the strain means171   mg/dL 187   mg/dL
Median of the strain means166   mg/dL 188   mg/dL
SD of the strain means± 28.0 ± 31.3
Coefficient of variation (CV)0.164 0.167
Min–max range of strain means108   –   230   mg/dL 127   –   268   mg/dL
Mean sample size per strain10.2   mice 12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 82481.7217 82481.7217 62.8596 < 0.0001
strain 41 676564.0491 16501.5622 12.5759 < 0.0001
sex:strain 41 83884.7423 2045.9693 1.5592 0.0149
Residuals 883 1158635.5159 1312.158


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 170.0 14.9   10 4.73 0.0878 152.0, 194.0 -0.03
129S1/SvImJ m 212.0 33.4   9 11.1 0.158 158.0, 266.0 0.79
A/J f 157.0 14.7   11 4.43 0.0934 138.0, 179.0 -0.5
A/J m 203.0 44.0   23 9.18 0.217 147.0, 308.0 0.5
AKR/J f 204.0 29.7   14 7.93 0.145 172.0, 259.0 1.18
AKR/J m 225.0 14.7   9 4.89 0.0653 211.0, 255.0 1.21
BALB/cByJ f 183.0 33.6   12 9.71 0.184 133.0, 251.0 0.43
BALB/cByJ m 167.0 24.8   22 5.29 0.148 130.0, 223.0 -0.65
BALB/cJ f 146.0 13.7   10 4.33 0.0934 128.0, 173.0 -0.89
BALB/cJ m 158.0 20.1   10 6.36 0.128 131.0, 199.0 -0.93
BTBR T+ Itpr3tf/J f 162.0 14.5   8 5.13 0.0895 138.0, 179.0 -0.32
BTBR T+ Itpr3tf/J m 160.0 31.4   7 11.9 0.196 131.0, 225.0 -0.87
BUB/BnJ f 163.0 23.5   11 7.09 0.144 139.0, 216.0 -0.28
BUB/BnJ m 171.0 25.4   5 11.4 0.149 143.0, 198.0 -0.52
C3H/HeJ f 170.0 39.3   10 12.4 0.232 135.0, 266.0 -0.03
C3H/HeJ m 207.0 23.8   26 4.66 0.115 166.0, 261.0 0.63
C57BL/10J f 230.0 25.5   10 8.07 0.111 207.0, 276.0 2.11
C57BL/10J m 263.0 57.3   15 14.8 0.218 181.0, 368.0 2.42
C57BL/6J f 224.0 27.5   10 8.69 0.123 190.0, 268.0 1.9
C57BL/6J m 218.0 45.6   12 13.2 0.209 112.0, 277.0 0.98
C57BLKS/J f 167.0 29.1   11 8.78 0.174 116.0, 236.0 -0.14
C57BLKS/J m 188.0 15.4   10 4.87 0.0818 159.0, 210.0 0.02
C57BR/cdJ f 148.0 28.9   10 9.13 0.195 109.0, 197.0 -0.82
C57BR/cdJ m 148.0 28.5   12 8.22 0.192 93.0, 199.0 -1.25
C57L/J f 167.0 29.1   10 9.2 0.174 134.0, 235.0 -0.14
C57L/J m 200.0 22.9   10 7.24 0.114 157.0, 231.0 0.41
C58/J f 142.0 16.7   5 7.46 0.118 121.0, 162.0 -1.03
C58/J m 160.0 69.4   11 20.9 0.433 61.0, 280.0 -0.87
CAST/EiJ f 196.0 22.6   9 7.54 0.115 171.0, 230.0 0.9
CAST/EiJ m 217.0 32.5   10 10.3 0.15 141.0, 258.0 0.95
CBA/J f 198.0 17.9   8 6.34 0.0908 171.0, 221.0 0.97
CBA/J m 268.0 50.8   10 16.1 0.189 195.0, 352.0 2.58
CE/J m 142.0 17.6   9 5.85 0.124 107.0, 164.0 -1.44
CZECHII/EiJ f 162.0 40.5   18 9.53 0.25 102.0, 236.0 -0.32
CZECHII/EiJ m 197.0 57.0   13 15.8 0.289 90.0, 274.0 0.31
DBA/1J f 149.0 29.2   9 9.72 0.195 101.0, 199.0 -0.78
DBA/1J m 179.0 50.0   10 15.8 0.279 80.0, 245.0 -0.26
DBA/2J f 174.0 18.8   10 5.93 0.108 144.0, 206.0 0.11
DBA/2J m 192.0 20.3   10 6.43 0.106 157.0, 216.0 0.15
FVB/NJ f 190.0 34.5   11 10.4 0.182 143.0, 266.0 0.68
FVB/NJ m 229.0 29.8   10 9.42 0.13 194.0, 280.0 1.33
I/LnJ f 186.0 22.2   10 7.02 0.119 153.0, 217.0 0.54
I/LnJ m 178.0 34.6   10 10.9 0.194 137.0, 240.0 -0.29
JF1/MsJ f 200.0 33.9   10 10.7 0.17 132.0, 257.0 1.04
JF1/MsJ m 228.0 59.5   14 15.9 0.261 138.0, 332.0 1.3
KK/HlJ f 229.0 12.3   7 4.64 0.0536 212.0, 246.0 2.08
KK/HlJ m 189.0 55.3   5 24.7 0.293 143.0, 279.0 0.06
LP/J f 125.0 22.1   11 6.67 0.177 80.0, 163.0 -1.64
LP/J m 144.0 17.3   12 5.0 0.121 119.0, 180.0 -1.38
MA/MyJ f 158.0 20.8   10 6.57 0.131 133.0, 187.0 -0.46
MA/MyJ m 189.0 28.1   10 8.9 0.149 160.0, 249.0 0.06
MOLF/EiJ f 194.0 21.1   7 7.96 0.109 164.0, 232.0 0.83
MOLF/EiJ m 205.0 43.3   13 12.0 0.212 129.0, 281.0 0.57
MSM/MsJ f 191.0 18.1   8 6.39 0.0948 148.0, 203.0 0.72
MSM/MsJ m 189.0 27.5   14 7.36 0.146 144.0, 230.0 0.06
NOD/ShiLtJ f 163.0 125.0   16 31.3 0.769 81.0, 623.0 -0.28
NOD/ShiLtJ m 166.0 35.4   12 10.2 0.213 114.0, 231.0 -0.68
NON/ShiLtJ f 155.0 33.3   10 10.5 0.215 71.0, 196.0 -0.57
NON/ShiLtJ m 177.0 23.1   20 5.17 0.13 138.0, 229.0 -0.33
NZB/BlNJ f 166.0 27.3   14 7.3 0.164 111.0, 213.0 -0.17
NZB/BlNJ m 158.0 19.2   10 6.06 0.122 131.0, 185.0 -0.93
NZW/LacJ f 156.0 11.8   10 3.74 0.0759 134.0, 173.0 -0.53
NZW/LacJ m 191.0 38.8   8 13.7 0.203 135.0, 235.0 0.12
PERA/EiJ f 119.0 10.7   9 3.58 0.0901 108.0, 140.0 -1.85
PERA/EiJ m 127.0 23.7   9 7.89 0.186 103.0, 167.0 -1.92
PL/J f 184.0 27.1   11 8.16 0.147 154.0, 250.0 0.47
PL/J m 187.0 19.5   21 4.26 0.104 144.0, 217.0 -0.01
PWK/PhJ f 148.0 25.9   10 8.2 0.176 95.0, 175.0 -0.82
PWK/PhJ m 181.0 34.9   16 8.73 0.193 120.0, 240.0 -0.2
RF/J f 146.0 30.3   12 8.74 0.208 95.0, 187.0 -0.89
RF/J m 156.0 28.4   17 6.89 0.182 119.0, 218.0 -1.0
RIIIS/J f 152.0 15.5   10 4.89 0.102 135.0, 187.0 -0.67
RIIIS/J m 188.0 33.6   22 7.17 0.178 148.0, 266.0 0.02
SEA/GnJ f 148.0 22.7   10 7.17 0.153 118.0, 188.0 -0.82
SEA/GnJ m 145.0 8.71   7 3.29 0.06 132.0, 158.0 -1.35
SJL/J f 192.0 25.6   10 8.11 0.134 158.0, 230.0 0.76
SJL/J m 219.0 33.0   15 8.52 0.151 161.0, 286.0 1.01
SM/J f 160.0 15.3   9 5.1 0.0954 140.0, 191.0 -0.39
SM/J m 184.0 23.9   17 5.8 0.13 137.0, 228.0 -0.1
SPRET/EiJ f 218.0 38.2   11 11.5 0.175 137.0, 287.0 1.69
SPRET/EiJ m 219.0 43.5   13 12.1 0.199 142.0, 276.0 1.01
SWR/J f 176.0 47.9   12 13.8 0.272 129.0, 286.0 0.18
SWR/J m 183.0 40.7   12 11.8 0.223 115.0, 247.0 -0.14
WSB/EiJ f 108.0 43.5   8 15.4 0.403 22.0, 154.0 -2.25
WSB/EiJ m 144.0 43.2   14 11.5 0.299 69.0, 220.0 -1.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 170.2 11.4549 192.6821 147.7179
129S1/SvImJ m 211.7778 12.0746 235.476 188.0796
A/J f 157.2727 10.9219 178.7086 135.8369
A/J m 202.6957 7.5532 217.5199 187.8714
AKR/J f 204.2143 9.6812 223.2151 185.2134
AKR/J m 224.6667 12.0746 248.3649 200.9685
BALB/cByJ f 182.75 10.4569 203.2733 162.2267
BALB/cByJ m 167.3182 7.7229 182.4756 152.1608
BALB/cJ f 146.5 11.4549 168.9821 124.0179
BALB/cJ m 157.8 11.4549 180.2821 135.3179
BTBR T+ Itpr3tf/J f 162.0 12.807 187.1358 136.8642
BTBR T+ Itpr3tf/J m 160.2857 13.6913 187.157 133.4145
BUB/BnJ f 163.1818 10.9219 184.6177 141.746
BUB/BnJ m 170.8 16.1997 202.5945 139.0055
C3H/HeJ f 169.5 11.4549 191.9821 147.0179
C3H/HeJ m 207.1538 7.1041 221.0967 193.211
C57BL/10J f 230.1 11.4549 252.5821 207.6179
C57BL/10J m 262.8667 9.3529 281.2232 244.5101
C57BL/6J f 223.9 11.4549 246.3821 201.4179
C57BL/6J m 217.8333 10.4569 238.3566 197.3101
C57BLKS/J f 167.0 10.9219 188.4358 145.5642
C57BLKS/J m 188.1 11.4549 210.5821 165.6179
C57BR/cdJ f 147.9 11.4549 170.3821 125.4179
C57BR/cdJ m 147.9167 10.4569 168.4399 127.3934
C57L/J f 167.1 11.4549 189.5821 144.6179
C57L/J m 200.2 11.4549 222.6821 177.7179
C58/J f 142.0 16.1997 173.7945 110.2055
C58/J m 160.2727 10.9219 181.7086 138.8369
CAST/EiJ f 196.1111 12.0746 219.8093 172.4129
CAST/EiJ m 216.8 11.4549 239.2821 194.3179
CBA/J f 197.5 12.807 222.6358 172.3642
CBA/J m 268.2 11.4549 290.6821 245.7179
CZECHII/EiJ f 161.7778 8.538 178.5349 145.0206
CZECHII/EiJ m 197.0769 10.0467 216.795 177.3588
DBA/1J f 149.3333 12.0746 173.0315 125.6351
DBA/1J m 179.1 11.4549 201.5821 156.6179
DBA/2J f 174.1 11.4549 196.5821 151.6179
DBA/2J m 191.8 11.4549 214.2821 169.3179
FVB/NJ f 189.7273 10.9219 211.1631 168.2914
FVB/NJ m 228.9 11.4549 251.3821 206.4179
I/LnJ f 185.9 11.4549 208.3821 163.4179
I/LnJ m 178.0 11.4549 200.4821 155.5179
JF1/MsJ f 199.7 11.4549 222.1821 177.2179
JF1/MsJ m 228.1429 9.6812 247.1437 209.142
KK/HlJ f 229.2857 13.6913 256.157 202.4145
KK/HlJ m 189.0 16.1997 220.7945 157.2055
LP/J f 125.3636 10.9219 146.7995 103.9278
LP/J m 143.8333 10.4569 164.3566 123.3101
MA/MyJ f 158.3 11.4549 180.7821 135.8179
MA/MyJ m 189.3 11.4549 211.7821 166.8179
MOLF/EiJ f 194.0 13.6913 220.8712 167.1288
MOLF/EiJ m 204.6154 10.0467 224.3335 184.8973
MSM/MsJ f 190.625 12.807 215.7608 165.4892
MSM/MsJ m 189.2143 9.6812 208.2151 170.2134
NOD/ShiLtJ f 162.6875 9.0559 180.4612 144.9138
NOD/ShiLtJ m 166.0 10.4569 186.5233 145.4767
NON/ShiLtJ f 155.0 11.4549 177.4821 132.5179
NON/ShiLtJ m 177.35 8.0999 193.2472 161.4528
NZB/BlNJ f 166.3571 9.6812 185.358 147.3563
NZB/BlNJ m 157.5 11.4549 179.9821 135.0179
NZW/LacJ f 155.6 11.4549 178.0821 133.1179
NZW/LacJ m 191.0 12.807 216.1358 165.8642
PERA/EiJ f 119.2222 12.0746 142.9204 95.524
PERA/EiJ m 126.8889 12.0746 150.5871 103.1907
PL/J f 183.5455 10.9219 204.9813 162.1096
PL/J m 187.1429 7.9047 202.657 171.6287
PWK/PhJ f 147.7 11.4549 170.1821 125.2179
PWK/PhJ m 181.0 9.0559 198.7737 163.2263
RF/J f 145.5 10.4569 166.0233 124.9767
RF/J m 155.7059 8.7855 172.9489 138.4629
RIIIS/J f 151.8 11.4549 174.2821 129.3179
RIIIS/J m 188.5 7.7229 203.6574 173.3426
SEA/GnJ f 148.2 11.4549 170.6821 125.7179
SEA/GnJ m 145.1429 13.6913 172.0141 118.2716
SJL/J f 192.0 11.4549 214.4821 169.5179
SJL/J m 219.1333 9.3529 237.4899 200.7768
SM/J f 160.3333 12.0746 184.0315 136.6351
SM/J m 183.7059 8.7855 200.9489 166.4629
SPRET/EiJ f 217.8182 10.9219 239.254 196.3823
SPRET/EiJ m 218.7692 10.0467 238.4873 199.0511
SWR/J f 176.25 10.4569 196.7733 155.7267
SWR/J m 182.6667 10.4569 203.1899 162.1434
WSB/EiJ f 108.0 12.807 133.1358 82.8642
WSB/EiJ m 144.2857 9.6812 163.2866 125.2849


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 190.9889 8.3218 207.3218 174.656
A/J both 179.9842 6.6396 193.0154 166.9529
AKR/J both 214.4405 7.7382 229.6279 199.253
BALB/cByJ both 175.0341 6.4998 187.791 162.2772
BALB/cJ both 152.15 8.0999 168.0472 136.2528
BTBR T+ Itpr3tf/J both 161.1429 9.3738 179.5403 142.7454
BUB/BnJ both 166.9909 9.7688 186.1637 147.8181
C3H/HeJ both 188.3269 6.7395 201.5542 175.0996
C57BL/10J both 246.4833 7.3941 260.9955 231.9712
C57BL/6J both 220.8667 7.755 236.0871 205.6462
C57BLKS/J both 177.55 7.9136 193.0817 162.0183
C57BR/cdJ both 147.9083 7.755 163.1288 132.6879
C57L/J both 183.65 8.0999 199.5472 167.7528
C58/J both 151.1364 9.7688 170.3092 131.9636
CAST/EiJ both 206.4556 8.3218 222.7884 190.1227
CBA/J both 232.85 8.5912 249.7116 215.9884
CZECHII/EiJ both 179.4274 6.5923 192.3657 166.489
DBA/1J both 164.2167 8.3218 180.5495 147.8838
DBA/2J both 182.95 8.0999 198.8472 167.0528
FVB/NJ both 209.3136 7.9136 224.8454 193.7819
I/LnJ both 181.95 8.0999 197.8472 166.0528
JF1/MsJ both 213.9214 7.499 228.6394 199.2034
KK/HlJ both 209.1429 10.6052 229.9572 188.3285
LP/J both 134.5985 7.5603 149.4368 119.7602
MA/MyJ both 173.8 8.0999 189.6972 157.9028
MOLF/EiJ both 199.3077 8.491 215.9725 182.6429
MSM/MsJ both 189.9196 8.0272 205.6743 174.165
NOD/ShiLtJ both 164.3437 6.9166 177.9186 150.7689
NON/ShiLtJ both 166.175 7.0147 179.9424 152.4076
NZB/BlNJ both 161.9286 7.499 176.6466 147.2106
NZW/LacJ both 173.3 8.5912 190.1616 156.4384
PERA/EiJ both 123.0556 8.538 139.8127 106.2984
PL/J both 185.3442 6.7411 198.5746 172.1137
PWK/PhJ both 164.35 7.3011 178.6796 150.0204
RF/J both 150.6029 6.8288 164.0056 137.2003
RIIIS/J both 170.15 6.9076 183.7072 156.5928
SEA/GnJ both 146.6714 8.9256 164.1893 129.1535
SJL/J both 205.5667 7.3941 220.0788 191.0545
SM/J both 172.0196 7.4663 186.6733 157.3659
SPRET/EiJ both 218.2937 7.4199 232.8565 203.7309
SWR/J both 179.4583 7.3941 193.9705 164.9462
WSB/EiJ both 126.1429 8.0272 141.8975 110.3882




  GWAS USING LINEAR MIXED MODELS