Phenotype measure:   Jones1   amplitude_P1

ID, description, units MPD:14205   amplitude_P1   amplitude of 1st positive response peak (P1), VsEPs waveform   [µV]
Data set, strains Jones1   inbred   13 strains     sex: both     age: 5-56wks
Procedure vestibular stimulus test
Ontology mappings

  STRAIN COMPARISON PLOT
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Jones1 - amplitude of 1st positive response peak (P1), VsEPs waveform



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains13 strains
Mean of the strain means1.15   µV 1.04   µV
Median of the strain means1.08   µV 0.977   µV
SD of the strain means± 0.350 ± 0.388
Coefficient of variation (CV)0.305 0.371
Min–max range of strain means0.568   –   1.73   µV 0.512   –   1.96   µV
Mean sample size per strain2.9   mice 3.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0302 0.0302 0.1761 0.6764
strain 9 4.9886 0.5543 3.2376 0.0033
sex:strain 9 1.6574 0.1842 1.0757 0.3955
Residuals 54 9.2451 0.1712


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/HeJ m 1.08 0.313   3 0.181 0.289 0.861, 1.44 0.09
A/WySnJ f 1.07 0.262   4 0.131 0.245 0.726, 1.36 -0.22
A/WySnJ m 0.696 0.293   2   0.207 0.422 0.488, 0.903 -0.9
BALB/cByJ m 0.894 0.14   3 0.0807 0.156 0.739, 1.01 -0.39
BUB/BnJ f 1.04 0.542   4 0.271 0.519 0.33, 1.64 -0.31
C3H/HeSnJ f 1.26 0.461   3 0.266 0.368 0.915, 1.78 0.32
C3H/HeSnJ m 1.96 0.566   2   0.4 0.289 1.56, 2.36 2.36
C57BL/6J f 1.55 0.631   6 0.257 0.406 1.04, 2.69 1.15
C57BL/6J m 1.37 0.462   15 0.119 0.336 0.537, 2.09 0.84
CAST/EiJ f 1.25 0.334   4 0.167 0.267 0.952, 1.73 0.29
CBA/J f 0.849 0.121   2   0.0855 0.143 0.763, 0.934 -0.85
CBA/J m 0.53 0.0431   2   0.0305 0.0813 0.5, 0.561 -1.33
DBA/1LacJ f 1.55 0.7   2   0.495 0.45 1.06, 2.05 1.15
DBA/1LacJ m 1.21 0.334   2   0.236 0.276 0.977, 1.45 0.43
DBA/2J f 1.08 0.237   3 0.137 0.22 0.836, 1.31 -0.19
DBA/2J m 1.22 0.465   6 0.19 0.381 0.739, 1.95 0.45
JF1/MsJ f 0.568 0.0262   2   0.0185 0.0461 0.549, 0.586 -1.66
LP/J f 0.988 0.144   4 0.0721 0.146 0.842, 1.17 -0.46
LP/J m 0.88 0.216   4 0.108 0.245 0.677, 1.1 -0.42
MRL/MpJ m 0.512 0.183   4 0.0916 0.357 0.348, 0.677 -1.37
NOD/ShiLtJ f 0.631 0.194   2   0.138 0.308 0.494, 0.769 -1.48
NOD/ShiLtJ m 0.977 0.421   4 0.211 0.431 0.629, 1.52 -0.17
SJL/J f 1.73 0.276   2   0.195 0.159 1.54, 1.93 1.67
SJL/J m 1.3 0.334   4 0.167 0.257 1.01, 1.7 0.66
SKH2/J f 1.35 0.389   2   0.275 0.287 1.08, 1.63 0.58
SKH2/J m 0.946 0.209   3 0.121 0.221 0.708, 1.1 -0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/WySnJ f 1.069 0.2069 1.4838 0.6542
A/WySnJ m 0.6955 0.2926 1.2821 0.1089
C3H/HeSnJ f 1.255 0.2389 1.7339 0.7761
C3H/HeSnJ m 1.96 0.2926 2.5466 1.3734
C57BL/6J f 1.555 0.1689 1.8937 1.2163
C57BL/6J m 1.3727 0.1068 1.5869 1.1585
CBA/J f 0.8485 0.2926 1.4351 0.2619
CBA/J m 0.5305 0.2926 1.1171 0.0
DBA/1LacJ f 1.555 0.2926 2.1416 0.9684
DBA/1LacJ m 1.2135 0.2926 1.8001 0.6269
DBA/2J f 1.0787 0.2389 1.5576 0.5997
DBA/2J m 1.2198 0.1689 1.5585 0.8812
LP/J f 0.9877 0.2069 1.4025 0.573
LP/J m 0.8803 0.2069 1.295 0.4655
NOD/ShiLtJ f 0.6315 0.2926 1.2181 0.0449
NOD/ShiLtJ m 0.977 0.2069 1.3918 0.5622
SJL/J f 1.735 0.2926 2.3216 1.1484
SJL/J m 1.3 0.2069 1.7148 0.8852
SKH2/J f 1.355 0.2926 1.9416 0.7684
SKH2/J m 0.946 0.2389 1.4249 0.4671


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/WySnJ both 0.8822 0.1792 1.2415 0.523
C3H/HeSnJ both 1.6075 0.1889 1.9861 1.2289
C57BL/6J both 1.4639 0.0999 1.6642 1.2635
CBA/J both 0.6895 0.2069 1.1043 0.2747
DBA/1LacJ both 1.3842 0.2069 1.799 0.9695
DBA/2J both 1.1492 0.1463 1.4425 0.856
LP/J both 0.934 0.1463 1.2273 0.6407
NOD/ShiLtJ both 0.8043 0.1792 1.1635 0.445
SJL/J both 1.5175 0.1792 1.8767 1.1583
SKH2/J both 1.1505 0.1889 1.5291 0.7719




  GWAS USING LINEAR MIXED MODELS