Phenotype measure:   Jones1   latency_PosPeak2

ID, description, units MPD:14203   latency_PosPeak2   latency of 2nd positive response peak (P2), VsEPs waveform   [µs]
Data set, strains Jones1   inbred   13 strains     sex: both     age: 5-56wks
Procedure vestibular stimulus test
Ontology mappings

  STRAIN COMPARISON PLOT
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Jones1 - latency of 2nd positive response peak (P2), VsEPs waveform



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means2309   µs 2262   µs
Median of the strain means2292   µs 2234   µs
SD of the strain means± 168 ± 87.6
Coefficient of variation (CV)0.0728 0.0388
Min–max range of strain means2049   –   2629   µs 2131   –   2427   µs
Mean sample size per strain2.7   mice 3.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 35712.4985 35712.4985 1.28 0.2636
strain 8 923339.5636 115417.4454 4.1368 0.0008
sex:strain 8 279152.2354 34894.0294 1.2507 0.2919
Residuals 47 1311309.641 27900.2051


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/HeJ m 2239.0 296.0   3 171.0 0.132 1913.0, 2492.0 -0.26
A/WySnJ f 2280.0 216.0   3 125.0 0.0949 2045.0, 2471.0 -0.17
BALB/cByJ m 2228.0 76.7   3 44.3 0.0344 2171.0, 2315.0 -0.38
BUB/BnJ f 2198.0 73.7   4 36.9 0.0336 2092.0, 2262.0 -0.66
C3H/HeSnJ f 2292.0 99.7   2   70.5 0.0435 2222.0, 2363.0 -0.1
C3H/HeSnJ m 2282.0 89.8   2   63.5 0.0393 2219.0, 2346.0 0.23
C57BL/6J f 2178.0 177.0   6 72.3 0.0813 1973.0, 2431.0 -0.78
C57BL/6J m 2190.0 135.0   13 37.4 0.0616 2008.0, 2473.0 -0.82
CAST/EiJ f 2381.0 175.0   4 87.4 0.0734 2192.0, 2586.0 0.43
CBA/J f 2049.0 143.0   2   101.0 0.0697 1948.0, 2150.0 -1.55
CBA/J m 2172.0 54.4   2   38.5 0.0251 2133.0, 2210.0 -1.02
DBA/1LacJ f 2391.0 317.0   2   224.0 0.132 2167.0, 2615.0 0.49
DBA/1LacJ m 2294.0 269.0   2   190.0 0.117 2104.0, 2484.0 0.37
DBA/2J f 2629.0 126.0   3 72.7 0.0479 2513.0, 2763.0 1.9
DBA/2J m 2427.0 203.0   6 82.7 0.0835 2194.0, 2771.0 1.89
JF1/MsJ f 2224.0 50.9   2   36.0 0.0229 2188.0, 2260.0 -0.51
LP/J f 2315.0 151.0   4 75.7 0.0654 2159.0, 2488.0 0.04
LP/J m 2131.0 196.0   4 97.9 0.0919 1930.0, 2340.0 -1.49
MRL/MpJ m 2230.0 83.4   2   59.0 0.0374 2171.0, 2289.0 -0.36
NOD/ShiLtJ f 2160.0 84.1   2   59.5 0.039 2100.0, 2219.0 -0.89
NOD/ShiLtJ m 2368.0 144.0   4 72.2 0.061 2151.0, 2447.0 1.21
SJL/J f 2620.0 180.0   2   127.0 0.0686 2493.0, 2747.0 1.85
SJL/J m 2360.0 195.0   4 97.6 0.0827 2090.0, 2514.0 1.12
SKH2/J f 2300.0 53.7   2   38.0 0.0234 2262.0, 2338.0 -0.05
SKH2/J m 2219.0 203.0   3 117.0 0.0915 2008.0, 2413.0 -0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeSnJ f 2292.5 118.1106 2530.1078 2054.8922
C3H/HeSnJ m 2282.5 118.1106 2520.1078 2044.8922
C57BL/6J f 2178.5 68.1912 2315.6829 2041.3171
C57BL/6J m 2190.2308 46.3268 2283.4282 2097.0333
CBA/J f 2049.0 118.1106 2286.6078 1811.3922
CBA/J m 2171.5 118.1106 2409.1078 1933.8922
DBA/1LacJ f 2391.0 118.1106 2628.6078 2153.3922
DBA/1LacJ m 2294.0 118.1106 2531.6078 2056.3922
DBA/2J f 2629.0 96.4369 2823.0059 2434.9941
DBA/2J m 2426.6667 68.1912 2563.8496 2289.4837
LP/J f 2315.0 83.5168 2483.0141 2146.9859
LP/J m 2130.75 83.5168 2298.7641 1962.7359
NOD/ShiLtJ f 2159.5 118.1106 2397.1078 1921.8922
NOD/ShiLtJ m 2367.5 83.5168 2535.5141 2199.4859
SJL/J f 2620.0 118.1106 2857.6078 2382.3922
SJL/J m 2360.25 83.5168 2528.2641 2192.2359
SKH2/J f 2300.0 118.1106 2537.6078 2062.3922
SKH2/J m 2219.0 96.4369 2413.0059 2024.9941


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeSnJ both 2287.5 83.5168 2455.5141 2119.4859
C57BL/6J both 2184.3654 41.2195 2267.2884 2101.4424
CBA/J both 2110.25 83.5168 2278.2641 1942.2359
DBA/1LacJ both 2342.5 83.5168 2510.5141 2174.4859
DBA/2J both 2527.8333 59.0553 2646.6372 2409.0294
LP/J both 2222.875 59.0553 2341.6789 2104.0711
NOD/ShiLtJ both 2263.5 72.3276 2409.0045 2117.9955
SJL/J both 2490.125 72.3276 2635.6295 2344.6205
SKH2/J both 2259.5 76.24 2412.8752 2106.1248




  GWAS USING LINEAR MIXED MODELS