Project measure / variable:   Jones1   latency_PosPeak1

ID, description, units MPD:14202   latency_PosPeak1   latency of 1st positive response peak (P1), VsEPs waveform   [µs]  
Data set, strains Jones1   inbred   18 strains     sex: both     age: 5-56wks
Procedure vestibular stimulus test
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  STRAIN COMPARISON PLOT
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Jones1 - latency of 1st positive response peak (P1), VsEPs waveform



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains13 strains
Mean of the strain means1405   µs 1372   µs
Median of the strain means1383   µs 1380   µs
SD of the strain means± 79.6 ± 56.3
Coefficient of variation (CV)0.0567 0.0410
Min–max range of strain means1312   –   1571   µs 1282   –   1475   µs
Mean sample size per strain2.9   mice 3.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15399.2491 15399.2491 2.2477 0.1396
strain 9 243612.1014 27068.0113 3.9509 0.0007
sex:strain 9 42242.2607 4693.5845 0.6851 0.719
Residuals 54 369960.9833 6851.1293


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/HeJ m 1386.0 148.0   3 85.2 0.107 1216.0, 1478.0 0.25
A/WySnJ f 1407.0 113.0   4 56.4 0.0801 1241.0, 1487.0 0.02
A/WySnJ m 1348.0 107.0   2   76.0 0.0797 1272.0, 1424.0 -0.42
BALB/cByJ m 1331.0 110.0   3 63.6 0.0827 1211.0, 1427.0 -0.72
BUB/BnJ f 1312.0 56.8   4 28.4 0.0433 1229.0, 1356.0 -1.17
C3H/HeSnJ f 1421.0 57.3   3 33.1 0.0403 1355.0, 1458.0 0.2
C3H/HeSnJ m 1399.0 72.1   2   51.0 0.0516 1348.0, 1450.0 0.48
C57BL/6J f 1342.0 92.8   6 37.9 0.0692 1221.0, 1467.0 -0.79
C57BL/6J m 1367.0 83.8   15 21.6 0.0613 1246.0, 1542.0 -0.08
CAST/EiJ f 1486.0 161.0   4 80.3 0.108 1356.0, 1710.0 1.02
CBA/J f 1332.0 50.9   2   36.0 0.0382 1296.0, 1368.0 -0.92
CBA/J m 1282.0 62.9   2   44.5 0.0491 1237.0, 1326.0 -1.6
DBA/1LacJ f 1368.0 65.8   2   46.5 0.0481 1321.0, 1414.0 -0.47
DBA/1LacJ m 1380.0 58.7   2   41.5 0.0425 1339.0, 1422.0 0.15
DBA/2J f 1571.0 18.4   3 10.6 0.0117 1558.0, 1592.0 2.08
DBA/2J m 1475.0 34.5   6 14.1 0.0234 1415.0, 1507.0 1.83
JF1/MsJ f 1346.0 36.1   2   25.5 0.0268 1321.0, 1372.0 -0.74
LP/J f 1383.0 110.0   4 54.8 0.0792 1296.0, 1541.0 -0.28
LP/J m 1298.0 101.0   4 50.7 0.0781 1182.0, 1402.0 -1.31
MRL/MpJ m 1436.0 109.0   4 54.6 0.0761 1279.0, 1533.0 1.14
NOD/ShiLtJ f 1390.0 24.0   2   17.0 0.0173 1373.0, 1407.0 -0.19
NOD/ShiLtJ m 1394.0 81.1   4 40.6 0.0582 1305.0, 1473.0 0.4
SJL/J f 1536.0 62.9   2   44.5 0.041 1491.0, 1580.0 1.64
SJL/J m 1423.0 111.0   4 55.4 0.0778 1258.0, 1495.0 0.91
SKH2/J f 1373.0 12.7   2   9.0 0.00927 1364.0, 1382.0 -0.4
SKH2/J m 1314.0 95.1   3 54.9 0.0724 1204.0, 1373.0 -1.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/WySnJ f 1407.25 41.3858 1490.2235 1324.2765
A/WySnJ m 1348.0 58.5283 1465.3422 1230.6578
C3H/HeSnJ f 1421.0 47.7882 1516.8095 1325.1905
C3H/HeSnJ m 1399.0 58.5283 1516.3422 1281.6578
C57BL/6J f 1342.3333 33.7913 1410.0809 1274.5858
C57BL/6J m 1367.4667 21.3715 1410.314 1324.6193
CBA/J f 1332.0 58.5283 1449.3422 1214.6578
CBA/J m 1281.5 58.5283 1398.8422 1164.1578
DBA/1LacJ f 1367.5 58.5283 1484.8422 1250.1578
DBA/1LacJ m 1380.5 58.5283 1497.8422 1263.1578
DBA/2J f 1571.0 47.7882 1666.8095 1475.1905
DBA/2J m 1475.0 33.7913 1542.7476 1407.2524
LP/J f 1382.75 41.3858 1465.7235 1299.7765
LP/J m 1297.5 41.3858 1380.4735 1214.5265
NOD/ShiLtJ f 1390.0 58.5283 1507.3422 1272.6578
NOD/ShiLtJ m 1394.25 41.3858 1477.2235 1311.2765
SJL/J f 1535.5 58.5283 1652.8422 1418.1578
SJL/J m 1423.0 41.3858 1505.9735 1340.0265
SKH2/J f 1373.0 58.5283 1490.3422 1255.6578
SKH2/J m 1313.6667 47.7882 1409.4762 1217.8571


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/WySnJ both 1377.625 35.8411 1449.4821 1305.7679
C3H/HeSnJ both 1410.0 37.7799 1485.7441 1334.2559
C57BL/6J both 1354.9 19.9912 1394.98 1314.82
CBA/J both 1306.75 41.3858 1389.7235 1223.7765
DBA/1LacJ both 1374.0 41.3858 1456.9735 1291.0265
DBA/2J both 1523.0 29.2642 1581.6711 1464.3289
LP/J both 1340.125 29.2642 1398.7961 1281.4539
NOD/ShiLtJ both 1392.125 35.8411 1463.9821 1320.2679
SJL/J both 1479.25 35.8411 1551.1071 1407.3929
SKH2/J both 1343.3333 37.7799 1419.0774 1267.5893




  GWAS USING LINEAR MIXED MODELS