Project measure / variable:   Johnson1   age_old

ID, description, units MPD:1406   age_old   age of older group (local parameter)   [d]  
Data set, strains Johnson1   inbred   27 strains     sex: both
Procedure colony observation
Ontology mappings


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  STRAIN COMPARISON PLOT
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Johnson1 - age of older group (local parameter)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested21 strains19 strains
Mean of the strain means257   d 219   d
Median of the strain means254   d 204   d
SD of the strain means± 84.3 ± 92.0
Coefficient of variation (CV)0.329 0.420
Min–max range of strain means114   –   451   d 105   –   507   d
Mean sample size per strain11.4   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1676.3106 1676.3106 0.0927 0.7609
strain 12 1682966.1772 140247.1814 7.757 < 0.0001
sex:strain 12 587376.6029 48948.0502 2.7073 0.0017
Residuals 340 6147241.7289 18080.1227


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J f 176.0 152.0   9 50.6 0.862 91.0, 560.0 -0.96
129P3/J m 196.0 4.5   9 1.5 0.023 190.0, 199.0 -0.25
129T2/SvEmsJ m 230.0 15.9   6 6.48 0.0689 216.0, 245.0 0.11
129X1/SvJ m 176.0 115.0   8 40.8 0.657 92.0, 315.0 -0.47
A/HeJ f 251.0 112.0   43 17.0 0.445 128.0, 547.0 -0.07
A/HeJ m 232.0 69.8   13 19.4 0.301 132.0, 365.0 0.14
A/J f 240.0 145.0   18 34.2 0.604 92.0, 693.0 -0.2
A/J m 204.0 80.6   19 18.5 0.396 128.0, 421.0 -0.17
A/WySnJ f 295.0 109.0   42 16.8 0.369 128.0, 547.0 0.46
A/WySnJ m 249.0 95.3   24 19.5 0.383 128.0, 547.0 0.32
BUB/BnJ m 105.0 22.4   7 8.48 0.213 92.0, 138.0 -1.24
C3H/HeJ f 144.0 0.0   6 0.0 0.0 144.0, 144.0 -1.33
C57BL/6J f 310.0 207.0   17 50.3 0.668 93.0, 730.0 0.63
C57BL/6J m 507.0 245.0   23 51.1 0.483 187.0, 733.0 3.12
C57BLKS/J f 156.0 65.7   7 24.8 0.422 103.0, 226.0 -1.19
C57BR/cdJ f 296.0 177.0   16 44.2 0.598 115.0, 753.0 0.47
C57BR/cdJ m 208.0 59.2   11 17.8 0.285 115.0, 290.0 -0.12
C57L/J f 287.0 87.5   22 18.7 0.304 126.0, 491.0 0.36
C57L/J m 346.0 110.0   9 36.7 0.318 252.0, 491.0 1.38
CAST/EiJ f 451.0 157.0   6 64.2 0.349 155.0, 543.0 2.31
CAST/EiJ m 324.0 232.0   9 77.2 0.714 115.0, 681.0 1.14
CBA/CaJ f 254.0 138.0   17 33.5 0.544 94.0, 688.0 -0.03
CBA/CaJ m 219.0 97.6   10 30.9 0.445 94.0, 330.0 0.0
DBA/2HaSmnJ f 196.0 108.0   6 44.1 0.549 98.0, 295.0 -0.72
DBA/2HaSmnJ m 169.0 98.1   6 40.0 0.582 98.0, 295.0 -0.55
DBA/2J m 189.0 63.3   9 21.1 0.335 98.0, 311.0 -0.33
IDH2/Ei f 317.0 28.1   9 9.38 0.0887 304.0, 392.0 0.72
LP/J f 401.0 136.0   5 60.8 0.339 340.0, 644.0 1.71
MA/MyJ m 143.0 92.7   9 30.9 0.648 98.0, 351.0 -0.83
MOLD/RkJ f 198.0 36.9   6 15.1 0.187 168.0, 262.0 -0.69
NOD/ShiLtJ m 111.0 37.3   9 12.4 0.337 94.0, 208.0 -1.18
NON/ShiLtJ f 190.0 6.21   6 2.54 0.0327 185.0, 200.0 -0.79
NON/ShiLtJ m 191.0 6.34   5 2.84 0.0332 185.0, 200.0 -0.31
P/J f 114.0 17.5   6 7.16 0.154 98.0, 130.0 -1.69
SENCARA/PtJ f 287.0 17.3   5 7.72 0.0602 274.0, 306.0 0.36
SKH2/J f 342.0 88.2   5 39.4 0.258 245.0, 406.0 1.01
SWR/J f 203.0 179.0   7 67.5 0.879 112.0, 600.0 -0.63
SWR/J m 157.0 41.1   5 18.4 0.262 112.0, 187.0 -0.68
YBR/EiJ f 279.0 123.0   6 50.1 0.44 129.0, 420.0 0.27
YBR/EiJ m 213.0 131.0   8 46.2 0.612 98.0, 420.0 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J f 176.1111 44.8208 264.2721 87.9502
129P3/J m 196.0 44.8208 284.1609 107.8391
A/HeJ f 250.8605 20.5053 291.1937 210.5272
A/HeJ m 231.6923 37.2931 305.0466 158.338
A/J f 239.8333 31.6931 302.1725 177.4941
A/J m 203.6842 30.8478 264.3607 143.0077
A/WySnJ f 294.5476 20.748 335.3582 253.737
A/WySnJ m 249.0833 27.447 303.0707 195.096
C57BL/6J f 310.1176 32.6119 374.2642 245.9711
C57BL/6J m 507.3478 28.0373 562.4963 452.1993
C57BR/cdJ f 295.6875 33.6156 361.8082 229.5668
C57BR/cdJ m 207.5455 40.5419 287.29 127.8009
C57L/J f 287.4091 28.6675 343.797 231.0212
C57L/J m 346.4444 44.8208 434.6054 258.2835
CAST/EiJ f 450.6667 54.894 558.6413 342.692
CAST/EiJ m 324.4444 44.8208 412.6054 236.2835
CBA/CaJ f 253.8824 32.6119 318.0289 189.7358
CBA/CaJ m 219.4 42.5207 303.0368 135.7632
DBA/2HaSmnJ f 196.5 54.894 304.4747 88.5253
DBA/2HaSmnJ m 168.6667 54.894 276.6413 60.692
NON/ShiLtJ f 190.1667 54.894 298.1413 82.192
NON/ShiLtJ m 191.2 60.1334 309.4803 72.9197
SWR/J f 203.1429 50.822 303.108 103.1777
SWR/J m 157.0 60.1334 275.2803 38.7197
YBR/EiJ f 279.1667 54.894 387.1413 171.192
YBR/EiJ m 213.25 47.5396 306.7588 119.7412


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3/J both 186.0556 31.6931 248.3948 123.7164
A/HeJ both 241.2764 21.2794 283.1322 199.4206
A/J both 221.7588 22.1136 265.2554 178.2622
A/WySnJ both 271.8155 17.2033 305.6538 237.9771
C57BL/6J both 408.7327 21.5037 451.0297 366.4358
C57BR/cdJ both 251.6165 26.3328 303.4121 199.8209
C57L/J both 316.9268 26.6023 369.2526 264.601
CAST/EiJ both 387.5556 35.4339 457.2529 317.8582
CBA/CaJ both 236.6412 26.7934 289.3429 183.9394
DBA/2HaSmnJ both 182.5833 38.8159 258.9329 106.2337
NON/ShiLtJ both 190.6833 40.7105 270.7595 110.6072
SWR/J both 180.0714 39.3665 257.5041 102.6388
YBR/EiJ both 246.2083 36.309 317.6269 174.7898




  GWAS USING LINEAR MIXED MODELS