Phenotype measure:   Graubert1   PLT

ID, description, units MPD:11608   PLT   platelet count (PLT; units per volume x 103)   [n/µL]
Data set, strains Graubert1   inbred   20 strains     sex: both     age: 9wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Graubert1 - platelet count (PLT; units per volume x 103)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested20 strains20 strains
Mean of the strain means679   n/µL 748   n/µL
Median of the strain means656   n/µL 726   n/µL
SD of the strain means± 117 ± 141
Coefficient of variation (CV)0.172 0.189
Min–max range of strain means485   –   975   n/µL 492   –   1026   n/µL
Mean sample size per strain11.6   mice 11.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 669104.2687 669104.2687 21.6969 < 0.0001
strain 19 6312419.2694 332232.5931 10.7733 < 0.0001
sex:strain 19 972716.8982 51195.6262 1.6601 0.0403
Residuals 409 12613008.4724 30838.6515


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 485.0 115.0   12 33.2 0.237 361.0, 766.0 -1.66
129S1/SvImJ m 492.0 123.0   12 35.4 0.249 268.0, 709.0 -1.81
A/J f 669.0 249.0   12 72.0 0.373 252.0, 1257.0 -0.08
A/J m 929.0 180.0   12 52.1 0.194 594.0, 1210.0 1.28
AKR/J f 648.0 74.9   12 21.6 0.115 514.0, 817.0 -0.26
AKR/J m 627.0 173.0   12 49.9 0.276 318.0, 913.0 -0.85
BALB/cByJ f 822.0 142.0   12 40.9 0.172 651.0, 1028.0 1.23
BALB/cByJ m 806.0 213.0   12 61.5 0.264 259.0, 1028.0 0.41
C3H/HeJ f 711.0 238.0   12 68.6 0.334 72.0, 996.0 0.28
C3H/HeJ m 702.0 249.0   12 71.8 0.354 279.0, 1150.0 -0.32
C57BL/6J f 631.0 157.0   12 45.5 0.25 210.0, 858.0 -0.41
C57BL/6J m 687.0 103.0   13 28.6 0.15 488.0, 827.0 -0.43
C57L/J f 672.0 200.0   12 57.8 0.298 389.0, 975.0 -0.06
C57L/J m 727.0 159.0   12 46.0 0.219 397.0, 939.0 -0.15
C58/J f 590.0 113.0   12 32.5 0.191 423.0, 780.0 -0.76
C58/J m 727.0 154.0   12 44.5 0.212 478.0, 980.0 -0.15
CAST/EiJ f 563.0 101.0   12 29.2 0.18 405.0, 758.0 -0.99
CAST/EiJ m 704.0 138.0   12 39.7 0.195 474.0, 928.0 -0.31
DBA/2J f 618.0 140.0   10 44.4 0.227 454.0, 917.0 -0.52
DBA/2J m 590.0 205.0   7 77.5 0.348 251.0, 904.0 -1.12
FVB/NJ f 814.0 182.0   9 60.7 0.224 677.0, 1196.0 1.16
FVB/NJ m 795.0 128.0   10 40.5 0.161 615.0, 1057.0 0.34
MOLF/EiJ f 641.0 171.0   3 98.9 0.267 450.0, 781.0 -0.32
MOLF/EiJ m 726.0 148.0   11 44.7 0.204 523.0, 935.0 -0.15
NOD/ShiLtJ f 752.0 113.0   12 32.6 0.15 584.0, 905.0 0.63
NOD/ShiLtJ m 901.0 201.0   12 58.0 0.223 604.0, 1167.0 1.09
NZB/BlNJ f 809.0 175.0   12 50.5 0.216 498.0, 1075.0 1.12
NZB/BlNJ m 1026.0 73.1   12 21.1 0.0713 919.0, 1176.0 1.97
PERA/EiJ f 770.0 114.0   12 33.0 0.148 615.0, 1005.0 0.78
PERA/EiJ m 799.0 195.0   12 56.3 0.244 256.0, 1026.0 0.36
PL/J f 975.0 236.0   12 68.0 0.242 558.0, 1237.0 2.54
PL/J m 997.0 173.0   12 49.9 0.173 730.0, 1229.0 1.77
SJL/J f 665.0 139.0   9 46.3 0.209 369.0, 887.0 -0.12
SJL/J m 567.0 338.0   9 113.0 0.596 189.0, 1013.0 -1.28
SM/J f 578.0 147.0   12 42.4 0.254 242.0, 783.0 -0.86
SM/J m 683.0 141.0   12 40.8 0.207 515.0, 982.0 -0.46
SPRET/EiJ f 540.0 105.0   13 29.0 0.194 336.0, 755.0 -1.19
SPRET/EiJ m 624.0 287.0   7 108.0 0.46 254.0, 985.0 -0.87
SWR/J f 620.0 99.7   12 28.8 0.161 445.0, 762.0 -0.5
SWR/J m 843.0 322.0   12 92.9 0.382 331.0, 1382.0 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 485.0 50.6941 584.6534 385.3466
129S1/SvImJ m 491.5833 50.6941 591.2368 391.9299
A/J f 669.0833 50.6941 768.7368 569.4299
A/J m 929.1667 50.6941 1028.8201 829.5132
AKR/J f 648.4167 50.6941 748.0701 548.7632
AKR/J m 627.25 50.6941 726.9034 527.5966
BALB/cByJ f 822.1667 50.6941 921.8201 722.5132
BALB/cByJ m 806.3333 50.6941 905.9868 706.6799
C3H/HeJ f 710.8333 50.6941 810.4868 611.1799
C3H/HeJ m 702.25 50.6941 801.9034 602.5966
C57BL/6J f 630.9167 50.6941 730.5701 531.2632
C57BL/6J m 687.3846 48.7053 783.1285 591.6407
C57L/J f 672.5 50.6941 772.1534 572.8466
C57L/J m 727.1667 50.6941 826.8201 627.5132
C58/J f 589.5833 50.6941 689.2368 489.9299
C58/J m 727.3333 50.6941 826.9868 627.6799
CAST/EiJ f 563.0833 50.6941 662.7368 463.4299
CAST/EiJ m 704.3333 50.6941 803.9868 604.6799
DBA/2J f 617.9 55.5326 727.0649 508.7351
DBA/2J m 589.8571 66.3741 720.3341 459.3802
FVB/NJ f 814.3333 58.5365 929.4032 699.2635
FVB/NJ m 795.3 55.5326 904.4649 686.1351
MOLF/EiJ f 641.0 101.3881 840.3068 441.6932
MOLF/EiJ m 726.4545 52.9482 830.5391 622.3699
NOD/ShiLtJ f 752.25 50.6941 851.9034 652.5966
NOD/ShiLtJ m 900.6667 50.6941 1000.3201 801.0132
NZB/BlNJ f 809.0833 50.6941 908.7368 709.4299
NZB/BlNJ m 1025.6667 50.6941 1125.3201 926.0132
PERA/EiJ f 769.9167 50.6941 869.5701 670.2632
PERA/EiJ m 798.5833 50.6941 898.2368 698.9299
PL/J f 974.8333 50.6941 1074.4868 875.1799
PL/J m 997.25 50.6941 1096.9034 897.5966
SJL/J f 664.6667 58.5365 779.7365 549.5968
SJL/J m 566.8889 58.5365 681.9587 451.819
SM/J f 578.25 50.6941 677.9034 478.5966
SM/J m 682.8333 50.6941 782.4868 583.1799
SPRET/EiJ f 539.6154 48.7053 635.3593 443.8715
SPRET/EiJ m 623.7143 66.3741 754.1912 493.2373
SWR/J f 620.4167 50.6941 720.0701 520.7632
SWR/J m 842.6667 50.6941 942.3201 743.0132


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 488.2917 35.8461 558.7573 417.8261
A/J both 799.125 35.8461 869.5906 728.6594
AKR/J both 637.8333 35.8461 708.2989 567.3677
BALB/cByJ both 814.25 35.8461 884.7156 743.7844
C3H/HeJ both 706.5417 35.8461 777.0073 636.0761
C57BL/6J both 659.1506 35.15 728.2479 590.0534
C57L/J both 699.8333 35.8461 770.2989 629.3677
C58/J both 658.4583 35.8461 728.9239 587.9927
CAST/EiJ both 633.7083 35.8461 704.1739 563.2427
DBA/2J both 603.8786 43.2706 688.9391 518.818
FVB/NJ both 804.8167 40.3435 884.1231 725.5102
MOLF/EiJ both 683.7273 57.1906 796.1515 571.3031
NOD/ShiLtJ both 826.4583 35.8461 896.9239 755.9927
NZB/BlNJ both 917.375 35.8461 987.8406 846.9094
PERA/EiJ both 784.25 35.8461 854.7156 713.7844
PL/J both 986.0417 35.8461 1056.5073 915.5761
SJL/J both 615.7778 41.3915 697.1445 534.4111
SM/J both 630.5417 35.8461 701.0073 560.0761
SPRET/EiJ both 581.6648 41.1635 662.5832 500.7465
SWR/J both 731.5417 35.8461 802.0073 661.0761




  GWAS USING LINEAR MIXED MODELS