Project measure / variable:   Bennett4   XYZ_hr_ave_HFHS

ID, description, units MPD:114960   XYZ_hr_ave_HFHS   activity on x-axis plus y-axis plus z-axis (beam breaks) per hour, average for day and night   [n/h]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis plus z-axis (beam breaks) per hour, average for day and night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means3326.0   n/h
Median of the strain means3079.0   n/h
SD of the strain means± 1243.0
Coefficient of variation (CV)0.3737
Min–max range of strain means2052.0   –   7202.0   n/h
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 143650801.4112 6840514.3529 2.7479 0.0007
Residuals 76 189191880.15 2489366.8441


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 2365.0 506.4   5 226.5 0.2141 1754.0, 2993.0 -0.77
CC002/Unc f 2564.0 476.9   5 213.3 0.186 1914.0, 3102.0 -0.61
CC004/TauUnc f 5945.0 1703.0   5 761.4 0.2864 3867.0, 8339.0 2.11
CC006/TauUnc f 3017.0 678.8   4 339.4 0.225 2050.0, 3557.0 -0.25
CC008/GeniUnc f 2734.0 486.8   4 243.4 0.178 2233.0, 3312.0 -0.48
CC011/Unc f 3478.0 1197.0   5 535.4 0.3443 2094.0, 5335.0 0.12
CC012/GeniUnc f 2052.0 414.3   4 207.1 0.2019 1698.0, 2650.0 -1.02
CC019/TauUnc f 2547.0 374.5   5 167.5 0.147 1945.0, 2958.0 -0.63
CC024/GeniUnc f 3812.0 179.6   2   127.0 0.0471 3685.0, 3939.0 0.39
CC027/GeniUnc f 4918.0 724.8   5 324.1 0.1474 4079.0, 5900.0 1.28
CC028/GeniUnc f 2542.0 254.2   4 127.1 0.1 2274.0, 2859.0 -0.63
CC030/GeniUnc f 2641.0 499.2   5 223.2 0.189 2138.0, 3397.0 -0.55
CC032/GeniUnc f 3164.0 519.9   5 232.5 0.1643 2540.0, 3927.0 -0.13
CC035/Unc f 2581.0 582.3   5 260.4 0.2256 1989.0, 3534.0 -0.6
CC036/Unc f 3646.0 531.1   5 237.5 0.1457 3029.0, 4330.0 0.26
CC037/TauUnc f 3149.0 842.8   5 376.9 0.2677 2134.0, 4117.0 -0.14
CC040/TauUnc f 3141.0 667.6   4 333.8 0.2126 2275.0, 3895.0 -0.15
CC041/TauUnc f 2223.0 849.3   5 379.8 0.382 1357.0, 3148.0 -0.89
CC045/GeniUnc f 7202.0 7053.0   4 3526.0 0.9792 3571.0, 17779.0 3.12
CC059/TauUnc f 2611.0 793.9   5 355.1 0.3041 1477.0, 3507.0 -0.57
CC063/Unc f 3379.0 335.2   3 193.5 0.0992 3012.0, 3669.0 0.04
CC071/TauUnc f 3452.0 528.7   4 264.3 0.1532 2730.0, 3991.0 0.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 2365.0 705.6014234791 3770.3270284697 959.6729715303
CC002/Unc f 2564.4 705.6014234791 3969.7270284697 1159.0729715303
CC004/TauUnc f 5944.6 705.6014234791 7349.9270284697 4539.2729715303
CC006/TauUnc f 3016.75 788.88637396 4587.953383138 1445.546616862
CC008/GeniUnc f 2734.25 788.88637396 4305.453383138 1163.046616862
CC011/Unc f 3477.8 705.6014234791 4883.1270284697 2072.4729715303
CC012/GeniUnc f 2051.5 788.88637396 3622.703383138 480.296616862
CC019/TauUnc f 2547.2 705.6014234791 3952.5270284697 1141.8729715303
CC024/GeniUnc f 3812.0 1115.6538092256 6034.0171336803 1589.9828663197
CC027/GeniUnc f 4918.0 705.6014234791 6323.3270284697 3512.6729715303
CC028/GeniUnc f 2541.5 788.88637396 4112.703383138 970.296616862
CC030/GeniUnc f 2641.0 705.6014234791 4046.3270284697 1235.6729715303
CC032/GeniUnc f 3163.6 705.6014234791 4568.9270284697 1758.2729715303
CC035/Unc f 2581.0 705.6014234791 3986.3270284697 1175.6729715303
CC036/Unc f 3646.2 705.6014234791 5051.5270284697 2240.8729715303
CC037/TauUnc f 3148.6 705.6014234791 4553.9270284697 1743.2729715303
CC040/TauUnc f 3140.75 788.88637396 4711.953383138 1569.546616862
CC041/TauUnc f 2223.0 705.6014234791 3628.3270284697 817.6729715303
CC045/GeniUnc f 7202.25 788.88637396 8773.453383138 5631.046616862
CC059/TauUnc f 2610.6 705.6014234791 4015.9270284697 1205.2729715303
CC063/Unc f 3379.0 910.9275207317 5193.2693924128 1564.7306075872
CC071/TauUnc f 3451.75 788.88637396 5022.953383138 1880.546616862




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA