Project measure / variable:   Bennett4   XYZ_ave_HFHS

ID, description, units MPD:114942   XYZ_ave_HFHS   activity on x-axis plus y-axis plus z-axis (beam breaks), average for day and night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis plus z-axis (beam breaks), average for day and night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means2328.0   n
Median of the strain means2155.0   n
SD of the strain means± 870.0
Coefficient of variation (CV)0.3737
Min–max range of strain means1436.0   –   5042.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 70379926.0273 3351425.0489 2.7478 0.0007
Residuals 76 92695224.2847 1219674.0037


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 1656.0 354.4   5 158.5 0.214 1228.0, 2095.0 -0.77
CC002/Unc f 1795.0 334.0   5 149.3 0.186 1340.0, 2172.0 -0.61
CC004/TauUnc f 4161.0 1192.0   5 532.9 0.2864 2707.0, 5837.0 2.11
CC006/TauUnc f 2112.0 475.2   4 237.6 0.225 1435.0, 2490.0 -0.25
CC008/GeniUnc f 1914.0 340.8   4 170.4 0.1781 1563.0, 2318.0 -0.48
CC011/Unc f 2435.0 837.8   5 374.7 0.3441 1466.0, 3734.0 0.12
CC012/GeniUnc f 1436.0 290.2   4 145.1 0.2021 1188.0, 1855.0 -1.03
CC019/TauUnc f 1783.0 262.0   5 117.2 0.1469 1362.0, 2071.0 -0.63
CC024/GeniUnc f 2668.0 126.6   2   89.5 0.0474 2579.0, 2758.0 0.39
CC027/GeniUnc f 3443.0 507.4   5 226.9 0.1474 2855.0, 4130.0 1.28
CC028/GeniUnc f 1779.0 177.8   4 88.88 0.0999 1592.0, 2001.0 -0.63
CC030/GeniUnc f 1849.0 349.4   5 156.3 0.189 1497.0, 2378.0 -0.55
CC032/GeniUnc f 2215.0 364.0   5 162.8 0.1643 1778.0, 2749.0 -0.13
CC035/Unc f 1807.0 407.6   5 182.3 0.2256 1393.0, 2474.0 -0.6
CC036/Unc f 2552.0 372.0   5 166.4 0.1458 2120.0, 3031.0 0.26
CC037/TauUnc f 2204.0 589.9   5 263.8 0.2676 1494.0, 2882.0 -0.14
CC040/TauUnc f 2198.0 467.3   4 233.6 0.2126 1592.0, 2726.0 -0.15
CC041/TauUnc f 1556.0 594.4   5 265.8 0.382 950.1, 2204.0 -0.89
CC045/GeniUnc f 5042.0 4937.0   4 2468.0 0.9792 2500.0, 12445.0 3.12
CC059/TauUnc f 1827.0 555.7   5 248.5 0.3041 1034.0, 2455.0 -0.58
CC063/Unc f 2365.0 234.2   3 135.2 0.099 2109.0, 2568.0 0.04
CC071/TauUnc f 2416.0 370.2   4 185.1 0.1532 1911.0, 2794.0 0.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 1655.8 493.8975609872 2639.4822441886 672.1177558115
CC002/Unc f 1795.4 493.8975609872 2779.0822441885 811.7177558115
CC004/TauUnc f 4161.0 493.8975609872 5144.6822441885 3177.3177558114
CC006/TauUnc f 2111.75 552.1942601444 3211.5401831326 1011.9598168674
CC008/GeniUnc f 1913.75 552.1942601444 3013.5401831326 813.9598168674
CC011/Unc f 2434.6 493.8975609872 3418.2822441886 1450.9177558115
CC012/GeniUnc f 1435.75 552.1942601444 2535.5401831326 335.9598168674
CC019/TauUnc f 1783.2 493.8975609872 2766.8822441886 799.5177558115
CC024/GeniUnc f 2668.5 780.9206117608 4223.8381927509 1113.1618072491
CC027/GeniUnc f 3442.6 493.8975609872 4426.2822441885 2458.9177558114
CC028/GeniUnc f 1779.0 552.1942601444 2878.7901831326 679.2098168674
CC030/GeniUnc f 1848.8 493.8975609872 2832.4822441885 865.1177558115
CC032/GeniUnc f 2214.6 493.8975609872 3198.2822441885 1230.9177558115
CC035/Unc f 1806.8 493.8975609872 2790.4822441885 823.1177558115
CC036/Unc f 2552.2 493.8975609872 3535.8822441886 1568.5177558115
CC037/TauUnc f 2204.2 493.8975609872 3187.8822441885 1220.5177558115
CC040/TauUnc f 2198.25 552.1942601444 3298.0401831326 1098.4598168674
CC041/TauUnc f 1556.22 493.8975609872 2539.9022441885 572.5377558115
CC045/GeniUnc f 5041.5 552.1942601444 6141.2901831326 3941.7098168674
CC059/TauUnc f 1827.4 493.8975609872 2811.0822441885 843.7177558115
CC063/Unc f 2365.3333333333 637.6190094787 3635.2616499007 1095.4050167659
CC071/TauUnc f 2416.25 552.1942601444 3516.0401831326 1316.4598168674




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA