Project measure / variable:   Bennett4   XYZ_ave_HP

ID, description, units MPD:114941   XYZ_ave_HP   activity on x-axis plus y-axis plus z-axis (beam breaks), average for day and night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis plus z-axis (beam breaks), average for day and night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means2351.0   n
Median of the strain means2063.0   n
SD of the strain means± 1234.0
Coefficient of variation (CV)0.525
Min–max range of strain means1253.0   –   7375.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 158238529.2873 7535168.0613 19.7559 < 0.0001
Residuals 78 29750200.2827 381412.8241


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 2046.0 239.2   5 107.0 0.1169 1822.0, 2333.0 -0.25
CC002/Unc f 1645.0 273.3   5 122.2 0.1661 1400.0, 1997.0 -0.57
CC004/TauUnc f 7375.0 1957.0   5 875.2 0.2654 5047.0, 10418.0 4.07
CC006/TauUnc f 2972.0 298.4   4 149.2 0.1004 2547.0, 3193.0 0.5
CC008/GeniUnc f 2229.0 439.0   4 219.5 0.197 1677.0, 2610.0 -0.1
CC011/Unc f 2080.0 618.2   5 276.5 0.2973 1319.0, 2843.0 -0.22
CC012/GeniUnc f 1253.0 103.0   5 46.042 0.0822 1159.0, 1400.0 -0.89
CC019/TauUnc f 1926.0 183.2   5 81.94 0.0951 1663.0, 2149.0 -0.34
CC024/GeniUnc f 1922.0 125.2   2   88.5 0.0651 1833.0, 2010.0 -0.35
CC027/GeniUnc f 3285.0 641.5   5 286.9 0.1953 2444.0, 4112.0 0.76
CC028/GeniUnc f 1879.0 204.4   4 102.2 0.1088 1632.0, 2132.0 -0.38
CC030/GeniUnc f 1326.0 981.5   5 438.9 0.7403 129.6, 2397.0 -0.83
CC032/GeniUnc f 2248.0 228.7   5 102.3 0.1018 1858.0, 2431.0 -0.08
CC035/Unc f 1803.0 517.1   5 231.2 0.2868 1246.0, 2373.0 -0.44
CC036/Unc f 2533.0 474.4   4 237.2 0.1873 1855.0, 2962.0 0.15
CC037/TauUnc f 1877.0 260.4   5 116.5 0.1387 1469.0, 2150.0 -0.38
CC040/TauUnc f 2387.0 243.9   5 109.1 0.1022 2095.0, 2707.0 0.03
CC041/TauUnc f 1525.0 506.1   5 226.3 0.3319 997.1, 2074.0 -0.67
CC045/GeniUnc f 3030.0 595.8   4 297.9 0.1966 2293.0, 3563.0 0.55
CC059/TauUnc f 1871.0 329.2   5 147.2 0.1759 1302.0, 2157.0 -0.39
CC063/Unc f 2282.0 277.4   3 160.2 0.1216 1964.0, 2476.0 -0.06
CC071/TauUnc f 2224.0 378.4   5 169.2 0.1701 1740.0, 2606.0 -0.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 2045.8 276.1929847541 2595.6579941239 1495.942005876
CC002/Unc f 1645.2 276.192984754 2195.057994124 1095.3420058761
CC004/TauUnc f 7374.6 276.1929847541 7924.457994124 6824.7420058761
CC006/TauUnc f 2972.0 308.7931444093 3586.7599264164 2357.2400735836
CC008/GeniUnc f 2229.0 308.7931444093 2843.7599264164 1614.2400735836
CC011/Unc f 2079.8 276.192984754 2629.6579941239 1529.942005876
CC012/GeniUnc f 1253.0 276.1929847541 1802.8579941239 703.142005876
CC019/TauUnc f 1925.8 276.192984754 2475.657994124 1375.942005876
CC024/GeniUnc f 1921.5 436.6994527915 2790.9018255416 1052.0981744584
CC027/GeniUnc f 3285.2 276.192984754 3835.057994124 2735.3420058761
CC028/GeniUnc f 1879.25 308.7931444093 2494.0099264164 1264.4900735836
CC030/GeniUnc f 1325.78 276.192984754 1875.6379941239 775.922005876
CC032/GeniUnc f 2247.6 276.192984754 2797.457994124 1697.742005876
CC035/Unc f 1803.2 276.192984754 2353.0579941239 1253.342005876
CC036/Unc f 2533.25 308.7931444093 3148.0099264164 1918.4900735836
CC037/TauUnc f 1877.2 276.192984754 2427.057994124 1327.342005876
CC040/TauUnc f 2386.8 276.192984754 2936.657994124 1836.942005876
CC041/TauUnc f 1524.82 276.192984754 2074.677994124 974.962005876
CC045/GeniUnc f 3030.5 308.7931444093 3645.2599264164 2415.7400735836
CC059/TauUnc f 1871.0 276.192984754 2420.857994124 1321.142005876
CC063/Unc f 2281.6666666667 356.5636100973 2991.5302846737 1571.8030486596
CC071/TauUnc f 2224.4 276.192984754 2774.257994124 1674.542005876




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA