Project measure / variable:   Bennett4   XYZ_night_HFHS

ID, description, units MPD:114940   XYZ_night_HFHS   activity on x-axis plus y-axis plus z-axis (beam breaks), night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis plus z-axis (beam breaks), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means3337.0   n
Median of the strain means3039.0   n
SD of the strain means± 1412.0
Coefficient of variation (CV)0.4231
Min–max range of strain means1955.0   –   7757.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 183366531.8333 8731739.6111 2.4272 0.0027
Residuals 76 273400862.6667 3597379.7719


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 2139.0 300.9   5 134.5 0.1407 1751.0, 2531.0 -0.85
CC002/Unc f 2181.0 411.3   5 183.9 0.1886 1593.0, 2637.0 -0.82
CC004/TauUnc f 6319.0 2408.0   5 1077.0 0.3811 3451.0, 9310.0 2.11
CC006/TauUnc f 3305.0 921.5   4 460.8 0.2788 1996.0, 4142.0 -0.02
CC008/GeniUnc f 2263.0 255.6   4 127.8 0.113 1948.0, 2562.0 -0.76
CC011/Unc f 3202.0 1311.0   5 586.4 0.4095 1486.0, 5177.0 -0.1
CC012/GeniUnc f 1955.0 529.0   4 264.5 0.2706 1533.0, 2726.0 -0.98
CC019/TauUnc f 2506.0 277.0   5 123.9 0.1106 2158.0, 2844.0 -0.59
CC024/GeniUnc f 4116.0 19.799   2   14.0 0.0048 4102.0, 4130.0 0.55
CC027/GeniUnc f 4703.0 902.3   5 403.5 0.1919 3437.0, 5884.0 0.97
CC028/GeniUnc f 2472.0 375.6   4 187.8 0.1519 2157.0, 2969.0 -0.61
CC030/GeniUnc f 2725.0 551.5   5 246.6 0.2024 2402.0, 3702.0 -0.43
CC032/GeniUnc f 2961.0 933.0   5 417.2 0.3151 2247.0, 4540.0 -0.27
CC035/Unc f 2436.0 535.9   5 239.7 0.22 1912.0, 3335.0 -0.64
CC036/Unc f 3898.0 740.9   5 331.3 0.1901 2714.0, 4715.0 0.4
CC037/TauUnc f 3240.0 930.1   5 415.9 0.2871 2176.0, 4423.0 -0.07
CC040/TauUnc f 3117.0 446.1   4 223.0 0.1431 2562.0, 3654.0 -0.16
CC041/TauUnc f 2296.0 820.2   5 366.8 0.3572 1500.0, 3164.0 -0.74
CC045/GeniUnc f 7757.0 8498.0   4 4249.0 1.0955 3201.0, 20500.0 3.13
CC059/TauUnc f 2553.0 686.0   5 306.8 0.2687 1471.0, 3208.0 -0.56
CC063/Unc f 3839.0 422.3   3 243.8 0.11 3371.0, 4192.0 0.36
CC071/TauUnc f 3424.0 582.0   4 291.0 0.17 2571.0, 3859.0 0.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 2138.6 848.2192843752 3827.9751156625 449.2248843375
CC002/Unc f 2180.8 848.2192843752 3870.1751156625 491.4248843375
CC004/TauUnc f 6319.2 848.2192843752 8008.5751156624 4629.8248843375
CC006/TauUnc f 3305.0 948.3379898446 5193.7787990589 1416.2212009411
CC008/GeniUnc f 2262.75 948.3379898446 4151.5287990589 373.9712009411
CC011/Unc f 3202.0 848.2192843752 4891.3751156625 1512.6248843375
CC012/GeniUnc f 1955.0 948.3379898446 3843.7787990589 66.2212009411
CC019/TauUnc f 2505.6 848.2192843752 4194.9751156625 816.2248843375
CC024/GeniUnc f 4116.0 1341.1524469518 6787.1365939519 1444.8634060481
CC027/GeniUnc f 4702.8 848.2192843752 6392.1751156625 3013.4248843375
CC028/GeniUnc f 2471.75 948.3379898446 4360.5287990589 582.9712009411
CC030/GeniUnc f 2725.2 848.2192843752 4414.5751156625 1035.8248843375
CC032/GeniUnc f 2960.8 848.2192843752 4650.1751156625 1271.4248843375
CC035/Unc f 2436.2 848.2192843752 4125.5751156625 746.8248843375
CC036/Unc f 3898.2 848.2192843752 5587.5751156625 2208.8248843375
CC037/TauUnc f 3239.6 848.2192843752 4928.9751156625 1550.2248843375
CC040/TauUnc f 3116.75 948.3379898446 5005.5287990589 1227.9712009411
CC041/TauUnc f 2296.0 848.2192843752 3985.3751156625 606.6248843375
CC045/GeniUnc f 7757.25 948.3379898446 9646.0287990589 5868.4712009411
CC059/TauUnc f 2553.2 848.2192843752 4242.5751156625 863.8248843375
CC063/Unc f 3838.6666666667 1095.046387439 6019.6405628193 1657.692770514
CC071/TauUnc f 3423.5 948.3379898446 5312.2787990589 1534.7212009411




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA