Project measure / variable:   Bennett4   XYZ_day_HFHS

ID, description, units MPD:114938   XYZ_day_HFHS   activity on x-axis plus y-axis plus z-axis (beam breaks), day   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis plus z-axis (beam breaks), day HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1325.0   n
Median of the strain means1206.0   n
SD of the strain means± 412.1
Coefficient of variation (CV)0.311
Min–max range of strain means831.6   –   2326.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 15974199.8295 760676.1824 3.6623 < 0.0001
Residuals 76 15785558.5555 207704.7178


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 1172.0 454.3   5 203.2 0.3875 703.9, 1862.0 -0.37
CC002/Unc f 1413.0 315.9   5 141.3 0.2235 1087.0, 1762.0 0.21
CC004/TauUnc f 2003.0 422.2   5 188.8 0.2107 1313.0, 2364.0 1.64
CC006/TauUnc f 936.6 175.2   4 87.6 0.1871 834.9, 1198.0 -0.94
CC008/GeniUnc f 1565.0 440.5   4 220.2 0.2814 1178.0, 2075.0 0.58
CC011/Unc f 1667.0 554.8   5 248.1 0.3328 1123.0, 2292.0 0.83
CC012/GeniUnc f 917.0 58.73   4 29.363 0.064 844.1, 984.9 -0.99
CC019/TauUnc f 1060.0 287.6   5 128.6 0.2712 565.5, 1297.0 -0.64
CC024/GeniUnc f 1221.0 271.5   2   192.0 0.2224 1029.0, 1413.0 -0.25
CC027/GeniUnc f 2198.0 314.2   5 140.5 0.1429 1697.0, 2517.0 2.12
CC028/GeniUnc f 1094.0 83.0   4 41.499 0.0759 1027.0, 1205.0 -0.56
CC030/GeniUnc f 972.5 299.1   5 133.8 0.3076 591.6, 1289.0 -0.86
CC032/GeniUnc f 1469.0 578.5   5 258.7 0.3939 957.8, 2448.0 0.35
CC035/Unc f 1190.0 277.6   5 124.1 0.2332 901.9, 1613.0 -0.33
CC036/Unc f 1228.0 346.3   5 154.9 0.282 835.4, 1559.0 -0.24
CC037/TauUnc f 1168.0 347.6   5 155.5 0.2976 568.5, 1444.0 -0.38
CC040/TauUnc f 1293.0 496.2   4 248.1 0.3837 622.1, 1799.0 -0.08
CC041/TauUnc f 831.6 407.7   5 182.4 0.4903 399.7, 1305.0 -1.2
CC045/GeniUnc f 2326.0 1384.0   4 692.2 0.5953 1444.0, 4390.0 2.43
CC059/TauUnc f 1110.0 462.4   5 206.8 0.4166 596.8, 1744.0 -0.52
CC063/Unc f 892.0 49.531   3 28.597 0.0555 846.1, 944.5 -1.05
CC071/TauUnc f 1425.0 208.6   4 104.3 0.1464 1252.0, 1728.0 0.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 1172.48 203.8159551338 1578.4146552486 766.5453447514
CC002/Unc f 1413.2 203.8159551338 1819.1346552486 1007.2653447514
CC004/TauUnc f 2003.2 203.8159551338 2409.1346552486 1597.2653447514
CC006/TauUnc f 936.6 227.8731652891 1390.4487417794 482.7512582206
CC008/GeniUnc f 1565.25 227.8731652891 2019.0987417794 1111.4012582206
CC011/Unc f 1667.0 203.8159551338 2072.9346552486 1261.0653447514
CC012/GeniUnc f 917.0 227.8731652891 1370.8487417794 463.1512582206
CC019/TauUnc f 1060.5 203.8159551338 1466.4346552486 654.5653447514
CC024/GeniUnc f 1221.0 322.2613208528 1862.8390458903 579.1609541097
CC027/GeniUnc f 2198.4 203.8159551338 2604.3346552486 1792.4653447514
CC028/GeniUnc f 1094.0 227.8731652891 1547.8487417794 640.1512582206
CC030/GeniUnc f 972.52 203.8159551338 1378.4546552486 566.5853447514
CC032/GeniUnc f 1468.56 203.8159551338 1874.4946552486 1062.6253447514
CC035/Unc f 1190.38 203.8159551338 1596.3146552486 784.4453447514
CC036/Unc f 1228.1 203.8159551338 1634.0346552486 822.1653447514
CC037/TauUnc f 1168.1 203.8159551338 1574.0346552486 762.1653447514
CC040/TauUnc f 1293.275 227.8731652891 1747.1237417794 839.4262582206
CC041/TauUnc f 831.56 203.8159551338 1237.4946552486 425.6253447514
CC045/GeniUnc f 2325.5 227.8731652891 2779.3487417794 1871.6512582206
CC059/TauUnc f 1110.0 203.8159551338 1515.9346552486 704.0653447514
CC063/Unc f 892.0 263.1252666415 1416.0593864754 367.9406135246
CC071/TauUnc f 1424.75 227.8731652891 1878.5987417794 970.9012582206




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA