Project measure / variable:   Bennett4   XYZ_day_HP

ID, description, units MPD:114937   XYZ_day_HP   activity on x-axis plus y-axis plus z-axis (beam breaks), day   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis plus z-axis (beam breaks), day HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1377.0   n
Median of the strain means1271.0   n
SD of the strain means± 541.0
Coefficient of variation (CV)0.393
Min–max range of strain means692.3   –   3030.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 28786494.1838 1370785.4373 5.2864 < 0.0001
Residuals 78 20225806.6844 259305.2139


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 1295.0 241.1   5 107.8 0.1861 876.4, 1463.0 -0.15
CC002/Unc f 1291.0 186.1   5 83.22 0.1441 1088.0, 1586.0 -0.16
CC004/TauUnc f 3030.0 1543.0   5 690.0 0.5092 1503.0, 5053.0 3.06
CC006/TauUnc f 1634.0 347.3   4 173.6 0.2125 1187.0, 2013.0 0.48
CC008/GeniUnc f 1652.0 210.5   4 105.3 0.1275 1365.0, 1855.0 0.51
CC011/Unc f 1448.0 581.2   5 259.9 0.4014 551.5, 2051.0 0.13
CC012/GeniUnc f 897.4 127.0   5 56.77 0.1415 731.2, 1062.0 -0.89
CC019/TauUnc f 1086.0 138.4   5 61.88 0.1274 936.1, 1282.0 -0.54
CC024/GeniUnc f 866.2 286.7   2   202.7 0.331 663.5, 1069.0 -0.94
CC027/GeniUnc f 2000.0 763.6   5 341.5 0.3818 1190.0, 3224.0 1.15
CC028/GeniUnc f 1246.0 103.2   4 51.62 0.0829 1138.0, 1344.0 -0.24
CC030/GeniUnc f 692.3 599.9   5 268.3 0.8666 0.52941, 1602.0 -1.27
CC032/GeniUnc f 1935.0 460.7   5 206.0 0.238 1267.0, 2268.0 1.03
CC035/Unc f 1071.0 326.0   5 145.8 0.3045 756.3, 1571.0 -0.56
CC036/Unc f 1323.0 227.3   4 113.6 0.1718 1038.0, 1533.0 -0.1
CC037/TauUnc f 1035.0 348.9   5 156.0 0.3372 746.7, 1629.0 -0.63
CC040/TauUnc f 1251.0 328.2   5 146.8 0.2625 915.9, 1694.0 -0.23
CC041/TauUnc f 807.6 253.8   5 113.5 0.3142 568.4, 1230.0 -1.05
CC045/GeniUnc f 2247.0 550.7   4 275.4 0.2451 1637.0, 2957.0 1.61
CC059/TauUnc f 1130.0 247.1   5 110.5 0.2186 738.1, 1349.0 -0.46
CC063/Unc f 1038.0 159.8   3 92.23 0.154 878.5, 1198.0 -0.63
CC071/TauUnc f 1310.0 403.3   5 180.3 0.3078 981.9, 1984.0 -0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 1295.48 227.7301973398 1748.8559958539 842.1040041461
CC002/Unc f 1291.0 227.7301973398 1744.3759958539 837.6240041461
CC004/TauUnc f 3029.8 227.7301973398 3483.1759958539 2576.4240041461
CC006/TauUnc f 1634.25 254.6101008906 2141.139773048 1127.360226952
CC008/GeniUnc f 1651.75 254.6101008906 2158.639773048 1144.860226952
CC011/Unc f 1447.9 227.7301973398 1901.2759958539 994.5240041461
CC012/GeniUnc f 897.36 227.7301973398 1350.7359958539 443.9840041461
CC019/TauUnc f 1086.0 227.7301973398 1539.3759958539 632.6240041461
CC024/GeniUnc f 866.25 360.0730577967 1583.1003916727 149.3996083273
CC027/GeniUnc f 2000.0 227.7301973398 2453.3759958539 1546.6240041461
CC028/GeniUnc f 1246.0 254.6101008906 1752.889773048 739.110226952
CC030/GeniUnc f 692.265882 227.7301973398 1145.6418778539 238.8898861461
CC032/GeniUnc f 1935.4 227.7301973398 2388.7759958539 1482.0240041461
CC035/Unc f 1070.7 227.7301973398 1524.0759958539 617.3240041461
CC036/Unc f 1322.75 254.6101008906 1829.639773048 815.860226952
CC037/TauUnc f 1034.62 227.7301973398 1487.9959958539 581.2440041461
CC040/TauUnc f 1250.54 227.7301973398 1703.9159958539 797.1640041461
CC041/TauUnc f 807.6 227.7301973398 1260.9759958539 354.2240041461
CC045/GeniUnc f 2246.75 254.6101008906 2753.639773048 1739.860226952
CC059/TauUnc f 1130.22 227.7301973398 1583.5959958539 676.8440041461
CC063/Unc f 1037.5 293.9984205752 1622.8058938374 452.1941061626
CC071/TauUnc f 1309.98 227.7301973398 1763.3559958539 856.6040041461




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA