Project measure / variable:   Bennett4   prot_night_HFHS

ID, description, units MPD:114922   prot_night_HFHS   protein intake, night   [g]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure intake monitoring
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - protein intake, night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means0.45685   g
Median of the strain means0.43194   g
SD of the strain means± 0.189
Coefficient of variation (CV)0.4137
Min–max range of strain means0.14881   –   0.86222   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 3.0823 0.1468 3.3907 < 0.0001
Residuals 76 3.2898 0.0433


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 0.23747 0.11353   5 0.05077 0.4781 0.07335, 0.33654 -1.16
CC002/Unc f 0.62233 0.19915   5 0.08906 0.32 0.42942, 0.91937 0.88
CC004/TauUnc f 0.67372 0.28139   5 0.12584 0.4177 0.18697, 0.87311 1.15
CC006/TauUnc f 0.46969 0.18332   4 0.09166 0.3903 0.31113, 0.72905 0.07
CC008/GeniUnc f 0.341 0.17123   4 0.08562 0.5021 0.17654, 0.58115 -0.61
CC011/Unc f 0.3544 0.20332   5 0.09093 0.5737 0.12596, 0.67691 -0.54
CC012/GeniUnc f 0.30136 0.09388   4 0.04694 0.3115 0.17965, 0.37669 -0.82
CC019/TauUnc f 0.86222 0.52831   5 0.23627 0.6127 0.51991, 1.7904 2.14
CC024/GeniUnc f 0.81935 0.20348   2   0.14388 0.2483 0.67547, 0.96323 1.92
CC027/GeniUnc f 0.59937 0.12146   5 0.05432 0.2026 0.42259, 0.70052 0.75
CC028/GeniUnc f 0.61378 0.13348   4 0.06674 0.2175 0.48743, 0.77579 0.83
CC030/GeniUnc f 0.34771 0.11976   5 0.05356 0.3444 0.21777, 0.50828 -0.58
CC032/GeniUnc f 0.42664 0.33387   5 0.14931 0.7826 0.11841, 0.81078 -0.16
CC035/Unc f 0.25797 0.06208   5 0.02776 0.2407 0.17894, 0.31113 -1.05
CC036/Unc f 0.51917 0.0353   5 0.01579 0.068 0.47365, 0.55275 0.33
CC037/TauUnc f 0.38472 0.18863   5 0.08436 0.4903 0.16671, 0.58307 -0.38
CC040/TauUnc f 0.38831 0.12201   4 0.06101 0.3142 0.32264, 0.57108 -0.36
CC041/TauUnc f 0.20835 0.25698   5 0.11493 1.2335 0.02421, 0.62621 -1.31
CC045/GeniUnc f 0.45588 0.16178   4 0.08089 0.3549 0.24569, 0.60548 -0.01
CC059/TauUnc f 0.43724 0.07637   5 0.03415 0.1747 0.35356, 0.55994 -0.1
CC063/Unc f 0.14881 0.02868   3 0.01656 0.1927 0.12896, 0.18169 -1.63
CC071/TauUnc f 0.58127 0.10605   4 0.05302 0.1824 0.44488, 0.70328 0.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 0.23747 0.093045509 0.4227861918 0.0521538082
CC002/Unc f 0.622332 0.093045509 0.8076481918 0.4370158082
CC004/TauUnc f 0.673724 0.093045509 0.8590401918 0.4884078082
CC006/TauUnc f 0.4696925 0.1040280416 0.676882301 0.262502699
CC008/GeniUnc f 0.3410025 0.1040280416 0.548192301 0.133812699
CC011/Unc f 0.354396 0.093045509 0.5397121918 0.1690798082
CC012/GeniUnc f 0.30136 0.1040280416 0.508549801 0.094170199
CC019/TauUnc f 0.862216 0.093045509 1.0475321918 0.6768998082
CC024/GeniUnc f 0.81935 0.1471178673 1.1123606266 0.5263393734
CC027/GeniUnc f 0.599366 0.093045509 0.7846821918 0.4140498082
CC028/GeniUnc f 0.61378 0.1040280416 0.820969801 0.406590199
CC030/GeniUnc f 0.34771 0.093045509 0.5330261918 0.1623938082
CC032/GeniUnc f 0.42664 0.093045509 0.6119561918 0.2413238082
CC035/Unc f 0.257966 0.093045509 0.4432821918 0.0726498082
CC036/Unc f 0.519166 0.093045509 0.7044821918 0.3338498082
CC037/TauUnc f 0.384718 0.093045509 0.5700341918 0.1994018082
CC040/TauUnc f 0.3883125 0.1040280416 0.595502301 0.181122699
CC041/TauUnc f 0.208346 0.093045509 0.3936621918 0.0230298082
CC045/GeniUnc f 0.4558775 0.1040280416 0.663067301 0.248687699
CC059/TauUnc f 0.437236 0.093045509 0.6225521918 0.2519198082
CC063/Unc f 0.1488133333 0.1201212356 0.3880555081 -0.0904288415
CC071/TauUnc f 0.58127 0.1040280416 0.788459801 0.374080199




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA