Project measure / variable:   Bennett4   Z_night_HFHS

ID, description, units MPD:114904   Z_night_HFHS   activity on z-axis rearing movement (beam breaks), night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on z-axis rearing movement (beam breaks), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means581.0   n
Median of the strain means520.2   n
SD of the strain means± 213.9
Coefficient of variation (CV)0.3681
Min–max range of strain means295.4   –   1123.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 4160140.1159 198101.9103 2.5718 0.0015
Residuals 76 5854153.731 77028.3386


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 395.4 175.9   5 78.66 0.4449 261.1, 703.7 -0.87
CC002/Unc f 380.5 199.7   5 89.3 0.5248 218.4, 700.2 -0.94
CC004/TauUnc f 1123.0 680.1   5 304.2 0.6057 374.8, 2009.0 2.53
CC006/TauUnc f 377.3 73.42   4 36.71 0.1946 289.4, 440.1 -0.95
CC008/GeniUnc f 438.6 314.6   4 157.3 0.7173 236.2, 900.2 -0.67
CC011/Unc f 539.6 339.0   5 151.6 0.6282 214.5, 1103.0 -0.19
CC012/GeniUnc f 295.4 147.8   4 73.88 0.5001 191.1, 509.8 -1.34
CC019/TauUnc f 457.4 165.4   5 73.97 0.3616 300.0, 722.8 -0.58
CC024/GeniUnc f 802.6 11.597   2   8.2 0.0144 794.4, 810.8 1.04
CC027/GeniUnc f 646.6 141.4   5 63.22 0.2186 444.9, 817.8 0.31
CC028/GeniUnc f 531.9 154.0   4 77.0 0.2895 351.2, 727.6 -0.23
CC030/GeniUnc f 534.9 165.2   5 73.88 0.3089 264.9, 689.8 -0.22
CC032/GeniUnc f 496.0 203.7   5 91.09 0.4107 351.5, 849.2 -0.4
CC035/Unc f 463.6 225.1   5 100.7 0.4855 209.3, 811.5 -0.55
CC036/Unc f 907.5 545.3   5 243.9 0.6009 455.8, 1561.0 1.53
CC037/TauUnc f 730.0 213.3   5 95.37 0.2921 508.4, 1045.0 0.7
CC040/TauUnc f 418.1 286.7   4 143.3 0.6856 -0.76
CC041/TauUnc f 508.6 139.2   5 62.26 0.2737 286.1, 618.8 -0.34
CC045/GeniUnc f 764.5 192.0   4 95.99 0.2511 596.5, 997.0 0.86
CC059/TauUnc f 619.3 167.6   5 74.94 0.2706 402.6, 747.8 0.18
CC063/Unc f 939.7 297.1   3 171.5 0.3162 597.1, 1127.0 1.68
CC071/TauUnc f 412.1 127.8   4 63.92 0.3102 228.7, 524.9 -0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 395.38 124.1195702263 642.5855483406 148.1744516594
CC002/Unc f 380.48 124.1195702263 627.6855483406 133.2744516594
CC004/TauUnc f 1122.86 124.1195702263 1370.0655483406 875.6544516594
CC006/TauUnc f 377.3 138.769898182 653.6842052523 100.9157947477
CC008/GeniUnc f 438.55 138.769898182 714.9342052523 162.1657947477
CC011/Unc f 539.62 124.1195702263 786.8255483406 292.4144516594
CC012/GeniUnc f 295.45 138.769898182 571.8342052523 19.0657947477
CC019/TauUnc f 457.44 124.1195702263 704.6455483406 210.2344516594
CC024/GeniUnc f 802.6 196.2502720581 1193.4662914935 411.7337085065
CC027/GeniUnc f 646.64 124.1195702263 893.8455483406 399.4344516594
CC028/GeniUnc f 531.875 138.769898182 808.2592052523 255.4907947477
CC030/GeniUnc f 534.86 124.1195702263 782.0655483406 287.6544516594
CC032/GeniUnc f 495.98 124.1195702263 743.1855483406 248.7744516594
CC035/Unc f 463.6 124.1195702263 710.8055483406 216.3944516594
CC036/Unc f 907.54 124.1195702263 1154.7455483406 660.3344516594
CC037/TauUnc f 730.0 124.1195702263 977.2055483406 482.7944516594
CC040/TauUnc f 418.1 138.769898182 694.4842052523 141.7157947477
CC041/TauUnc f 508.64 124.1195702263 755.8455483406 261.4344516594
CC045/GeniUnc f 764.5 138.769898182 1040.8842052523 488.1157947477
CC059/TauUnc f 619.26 124.1195702263 866.4655483406 372.0544516594
CC063/Unc f 939.7 160.2376761416 1258.8409906044 620.5590093956
CC071/TauUnc f 412.125 138.769898182 688.5092052523 135.7407947477




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA