Project measure / variable:   Bennett4   Y_fine_ave_HFHS

ID, description, units MPD:114900   Y_fine_ave_HFHS   activity on y-axis fine movement (beam breaks), average for day and night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis fine movement (beam breaks), average for day and night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means335.9   n
Median of the strain means300.5   n
SD of the strain means± 74.68
Coefficient of variation (CV)0.2223
Min–max range of strain means234.4   –   501.1   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 518771.6412 24703.4115 2.0402 0.013
Residuals 76 920243.1913 12108.463


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 297.4 50.19   5 22.445 0.1687 236.1, 362.0 -0.52
CC002/Unc f 295.0 27.18   5 12.155 0.0921 258.4, 333.9 -0.55
CC004/TauUnc f 408.1 90.07   5 40.279 0.2207 317.6, 548.9 0.97
CC006/TauUnc f 389.1 33.981   4 16.99 0.0873 357.0, 434.8 0.71
CC008/GeniUnc f 288.2 84.27   4 42.136 0.2924 174.7, 367.3 -0.64
CC011/Unc f 444.0 213.7   5 95.56 0.4812 286.0, 820.0 1.45
CC012/GeniUnc f 263.0 23.67   4 11.835 0.09 239.7, 285.2 -0.98
CC019/TauUnc f 281.2 24.882   5 11.127 0.0885 239.6, 304.6 -0.73
CC024/GeniUnc f 412.6 20.435   2   14.45 0.0495 398.2, 427.1 1.03
CC027/GeniUnc f 462.1 31.793   5 14.218 0.0688 413.6, 496.6 1.69
CC028/GeniUnc f 302.6 39.188   4 19.594 0.1295 254.1, 342.6 -0.45
CC030/GeniUnc f 269.5 58.41   5 26.121 0.2168 213.0, 361.3 -0.89
CC032/GeniUnc f 339.0 34.723   5 15.529 0.1024 278.4, 363.5 0.04
CC035/Unc f 298.4 65.15   5 29.134 0.2183 215.3, 389.1 -0.5
CC036/Unc f 313.4 81.47   5 36.434 0.26 175.5, 386.0 -0.3
CC037/TauUnc f 289.5 131.1   5 58.64 0.453 116.6, 407.5 -0.62
CC040/TauUnc f 343.4 40.173   4 20.087 0.117 285.5, 375.1 0.1
CC041/TauUnc f 234.4 94.02   5 42.047 0.4011 80.5, 320.2 -1.36
CC045/GeniUnc f 501.1 369.1   4 184.6 0.7367 290.9, 1054.0 2.21
CC059/TauUnc f 252.5 120.6   5 53.91 0.4775 92.03, 345.1 -1.12
CC063/Unc f 293.7 77.25   3 44.602 0.263 237.9, 381.9 -0.57
CC071/TauUnc f 412.4 38.026   4 19.013 0.0922 358.3, 439.5 1.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 297.44 49.2106960797 395.4515954835 199.4284045165
CC002/Unc f 295.02 49.2106960797 393.0315954835 197.0084045165
CC004/TauUnc f 408.08 49.2106960797 506.0915954835 310.0684045165
CC006/TauUnc f 389.15 55.0192308272 498.7302950422 279.5697049578
CC008/GeniUnc f 288.25 55.0192308272 397.8302950422 178.6697049578
CC011/Unc f 444.02 49.2106960797 542.0315954835 346.0084045165
CC012/GeniUnc f 263.0 55.0192308272 372.5802950422 153.4197049578
CC019/TauUnc f 281.22 49.2106960797 379.2315954835 183.2084045165
CC024/GeniUnc f 412.65 77.8089424271 567.6199394175 257.6800605825
CC027/GeniUnc f 462.1 49.2106960797 560.1115954835 364.0884045165
CC028/GeniUnc f 302.575 55.0192308272 412.1552950422 192.9947049578
CC030/GeniUnc f 269.46 49.2106960797 367.4715954835 171.4484045165
CC032/GeniUnc f 338.98 49.2106960797 436.9915954835 240.9684045165
CC035/Unc f 298.38 49.2106960797 396.3915954835 200.3684045165
CC036/Unc f 313.4 49.2106960797 411.4115954835 215.3884045165
CC037/TauUnc f 289.46 49.2106960797 387.4715954835 191.4484045165
CC040/TauUnc f 343.4 55.0192308272 452.9802950422 233.8197049578
CC041/TauUnc f 234.38 49.2106960797 332.3915954835 136.3684045165
CC045/GeniUnc f 501.075 55.0192308272 610.6552950422 391.4947049578
CC059/TauUnc f 252.466 49.2106960797 350.4775954835 154.4544045165
CC063/Unc f 293.7333333333 63.5307354573 420.2657590143 167.2009076524
CC071/TauUnc f 412.375 55.0192308272 521.9552950422 302.7947049578




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA