Project measure / variable:   Bennett4   Y_fine_ave_HP

ID, description, units MPD:114899   Y_fine_ave_HP   activity on y-axis fine movement (beam breaks), average for day and night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis fine movement (beam breaks), average for day and night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means340.2   n
Median of the strain means319.9   n
SD of the strain means± 104.0
Coefficient of variation (CV)0.3056
Min–max range of strain means169.9   –   729.7   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1124266.0025 53536.4763 8.0086 < 0.0001
Residuals 78 521422.1675 6684.8996


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 330.5 34.519   5 15.437 0.1045 287.8, 380.6 -0.09
CC002/Unc f 267.1 32.126   5 14.367 0.1203 233.9, 317.3 -0.7
CC004/TauUnc f 729.7 244.6   5 109.4 0.3352 507.0, 1129.0 3.75
CC006/TauUnc f 409.4 24.793   4 12.396 0.0606 378.4, 439.1 0.67
CC008/GeniUnc f 376.5 79.54   4 39.772 0.2113 262.4, 447.0 0.35
CC011/Unc f 320.4 128.8   5 57.59 0.4019 125.6, 473.2 -0.19
CC012/GeniUnc f 245.8 20.067   5 8.9742 0.0817 219.3, 272.6 -0.91
CC019/TauUnc f 289.9 18.141   5 8.1128 0.0626 260.4, 308.4 -0.48
CC024/GeniUnc f 343.9 3.4648   2   2.45 0.0101 341.5, 346.4 0.04
CC027/GeniUnc f 442.2 61.42   5 27.468 0.1389 395.7, 544.4 0.98
CC028/GeniUnc f 306.6 10.847   4 5.4233 0.0354 297.1, 319.1 -0.32
CC030/GeniUnc f 169.9 103.0   5 46.068 0.6062 11.5, 266.1 -1.64
CC032/GeniUnc f 333.9 42.859   5 19.167 0.1284 270.7, 378.7 -0.06
CC035/Unc f 316.7 56.74   5 25.376 0.1792 253.3, 369.2 -0.23
CC036/Unc f 351.2 24.295   4 12.147 0.0692 319.4, 377.8 0.11
CC037/TauUnc f 318.5 51.57   5 23.062 0.1619 260.7, 379.7 -0.21
CC040/TauUnc f 317.0 46.355   5 20.731 0.1462 251.6, 365.4 -0.22
CC041/TauUnc f 264.6 56.9   5 25.449 0.215 213.4, 353.2 -0.73
CC045/GeniUnc f 391.7 61.41   4 30.705 0.1568 314.9, 456.3 0.5
CC059/TauUnc f 317.1 49.436   5 22.108 0.1559 235.7, 358.3 -0.22
CC063/Unc f 323.1 12.511   3 7.2231 0.0387 310.3, 335.3 -0.16
CC071/TauUnc f 319.3 111.4   5 49.835 0.349 122.9, 388.3 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 330.48 36.5647359715 403.2747974308 257.6852025692
CC002/Unc f 267.1 36.5647359715 339.8947974308 194.3052025692
CC004/TauUnc f 729.74 36.5647359715 802.5347974308 656.9452025692
CC006/TauUnc f 409.4 40.8806176058 490.7870577318 328.0129422682
CC008/GeniUnc f 376.5 40.8806176058 457.8870577318 295.1129422682
CC011/Unc f 320.42 36.5647359715 393.2147974308 247.6252025692
CC012/GeniUnc f 245.76 36.5647359715 318.5547974308 172.9652025692
CC019/TauUnc f 289.92 36.5647359715 362.7147974308 217.1252025692
CC024/GeniUnc f 343.95 57.8139238563 459.0486808459 228.8513191541
CC027/GeniUnc f 442.18 36.5647359715 514.9747974308 369.3852025692
CC028/GeniUnc f 306.625 40.8806176058 388.0120577318 225.2379422682
CC030/GeniUnc f 169.92 36.5647359715 242.7147974308 97.1252025692
CC032/GeniUnc f 333.86 36.5647359715 406.6547974308 261.0652025692
CC035/Unc f 316.72 36.5647359715 389.5147974308 243.9252025692
CC036/Unc f 351.225 40.8806176058 432.6120577318 269.8379422682
CC037/TauUnc f 318.54 36.5647359715 391.3347974308 245.7452025692
CC040/TauUnc f 317.04 36.5647359715 389.8347974308 244.2452025692
CC041/TauUnc f 264.64 36.5647359715 337.4347974308 191.8452025692
CC045/GeniUnc f 391.725 40.8806176058 473.1120577318 310.3379422682
CC059/TauUnc f 317.14 36.5647359715 389.9347974308 244.3452025692
CC063/Unc f 323.1 47.2048711587 417.07767938 229.12232062
CC071/TauUnc f 319.32 36.5647359715 392.1147974308 246.5252025692




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA