Project measure / variable:   Bennett4   Y_fine_night_HFHS

ID, description, units MPD:114898   Y_fine_night_HFHS   activity on y-axis fine movement (beam breaks), night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis fine movement (beam breaks), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means445.7   n
Median of the strain means413.0   n
SD of the strain means± 108.0
Coefficient of variation (CV)0.2423
Min–max range of strain means323.8   –   720.1   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1039938.4301 49520.8776 1.9685 0.0173
Residuals 76 1911857.8267 25156.024


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 371.2 49.898   5 22.315 0.1344 310.5, 448.2 -0.69
CC002/Unc f 351.1 28.607   5 12.793 0.0815 306.8, 374.2 -0.88
CC004/TauUnc f 559.2 151.5   5 67.76 0.2709 413.7, 812.2 1.05
CC006/TauUnc f 566.9 43.165   4 21.583 0.0761 523.9, 626.2 1.12
CC008/GeniUnc f 335.6 62.62   4 31.308 0.1866 256.4, 401.6 -1.02
CC011/Unc f 521.1 239.9   5 107.3 0.4603 281.6, 924.8 0.7
CC012/GeniUnc f 327.6 47.306   4 23.653 0.1444 276.6, 370.5 -1.09
CC019/TauUnc f 357.0 34.647   5 15.495 0.0971 311.5, 405.2 -0.82
CC024/GeniUnc f 577.8 5.2326   2   3.7 0.0091 574.1, 581.5 1.22
CC027/GeniUnc f 587.7 50.33   5 22.507 0.0856 523.4, 662.2 1.32
CC028/GeniUnc f 392.7 62.75   4 31.373 0.1598 340.4, 473.6 -0.49
CC030/GeniUnc f 373.4 108.7   5 48.62 0.2911 276.2, 553.1 -0.67
CC032/GeniUnc f 424.8 77.93   5 34.852 0.1834 345.0, 536.1 -0.19
CC035/Unc f 377.2 76.01   5 33.991 0.2015 300.1, 494.6 -0.63
CC036/Unc f 443.7 110.0   5 49.191 0.2479 293.2, 528.9 -0.02
CC037/TauUnc f 401.1 163.9   5 73.28 0.4086 204.2, 567.5 -0.41
CC040/TauUnc f 456.8 39.495   4 19.748 0.0865 415.6, 509.2 0.1
CC041/TauUnc f 323.8 114.3   5 51.13 0.3531 142.1, 422.3 -1.13
CC045/GeniUnc f 720.1 609.4   4 304.7 0.8462 398.0, 1634.0 2.54
CC059/TauUnc f 341.8 137.6   5 61.52 0.4025 139.7, 446.2 -0.96
CC063/Unc f 451.8 82.07   3 47.384 0.1816 394.2, 545.8 0.06
CC071/TauUnc f 542.5 70.76   4 35.38 0.1304 447.5, 601.1 0.9


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 371.16 70.9309862262 512.4313024418 229.8886975582
CC002/Unc f 351.14 70.9309862262 492.4113024418 209.8686975582
CC004/TauUnc f 559.24 70.9309862262 700.5113024417 417.9686975582
CC006/TauUnc f 566.875 79.3032534564 724.8211177648 408.9288822352
CC008/GeniUnc f 335.55 79.3032534564 493.4961177648 177.6038822352
CC011/Unc f 521.14 70.9309862262 662.4113024418 379.8686975582
CC012/GeniUnc f 327.65 79.3032534564 485.5961177648 169.7038822352
CC019/TauUnc f 357.0 70.9309862262 498.2713024418 215.7286975582
CC024/GeniUnc f 577.8 112.1517365784 801.1695418672 354.4304581328
CC027/GeniUnc f 587.66 70.9309862262 728.9313024418 446.3886975582
CC028/GeniUnc f 392.675 79.3032534564 550.6211177648 234.7288822352
CC030/GeniUnc f 373.44 70.9309862262 514.7113024418 232.1686975582
CC032/GeniUnc f 424.82 70.9309862262 566.0913024418 283.5486975582
CC035/Unc f 377.2 70.9309862262 518.4713024418 235.9286975582
CC036/Unc f 443.68 70.9309862262 584.9513024418 302.4086975582
CC037/TauUnc f 401.06 70.9309862262 542.3313024418 259.7886975582
CC040/TauUnc f 456.825 79.3032534564 614.7711177648 298.8788822352
CC041/TauUnc f 323.8 70.9309862262 465.0713024418 182.5286975582
CC045/GeniUnc f 720.15 79.3032534564 878.0961177648 562.2038822352
CC059/TauUnc f 341.8 70.9309862262 483.0713024418 200.5286975582
CC063/Unc f 451.8333333333 91.5715094613 634.2138005513 269.4528661154
CC071/TauUnc f 542.475 79.3032534564 700.4211177648 384.5288822352




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA