Project measure / variable:   Bennett4   Y_fine_day_HFHS

ID, description, units MPD:114896   Y_fine_day_HFHS   activity on y-axis fine movement (beam breaks), day   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis fine movement (beam breaks), day HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means226.9   n
Median of the strain means222.5   n
SD of the strain means± 57.29
Coefficient of variation (CV)0.2524
Min–max range of strain means135.7   –   366.9   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 318991.0802 15190.0514 2.1906 0.0071
Residuals 76 526992.8583 6934.1166


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 223.7 59.14   5 26.446 0.2644 161.7, 287.0 -0.06
CC002/Unc f 239.3 40.083   5 17.926 0.1675 205.4, 299.9 0.22
CC004/TauUnc f 256.9 104.4   5 46.678 0.4063 80.71, 359.9 0.52
CC006/TauUnc f 213.8 27.787   4 13.894 0.13 190.1, 243.4 -0.23
CC008/GeniUnc f 240.9 106.6   4 53.31 0.4425 93.0, 332.9 0.24
CC011/Unc f 366.9 198.1   5 88.62 0.5401 243.0, 715.2 2.44
CC012/GeniUnc f 198.4 6.5992   4 3.2996 0.0333 192.5, 205.2 -0.5
CC019/TauUnc f 205.5 25.708   5 11.497 0.1251 167.7, 230.1 -0.37
CC024/GeniUnc f 247.6 35.709   2   25.25 0.1442 222.3, 272.8 0.36
CC027/GeniUnc f 338.3 51.07   5 22.838 0.1509 266.6, 392.5 1.94
CC028/GeniUnc f 213.2 32.602   4 16.301 0.1529 167.7, 237.8 -0.24
CC030/GeniUnc f 165.5 24.776   5 11.08 0.1497 121.8, 180.2 -1.07
CC032/GeniUnc f 253.1 76.4   5 34.169 0.3018 167.8, 371.5 0.46
CC035/Unc f 221.3 55.83   5 24.968 0.2523 135.2, 283.6 -0.1
CC036/Unc f 185.2 82.77   5 37.016 0.4469 57.88, 266.9 -0.73
CC037/TauUnc f 177.9 101.2   5 45.276 0.5691 29.0, 252.1 -0.86
CC040/TauUnc f 232.0 56.87   4 28.434 0.2451 155.3, 289.5 0.09
CC041/TauUnc f 147.2 76.39   5 34.161 0.5191 18.882, 219.7 -1.39
CC045/GeniUnc f 281.8 135.4   4 67.69 0.4804 166.4, 473.2 0.96
CC059/TauUnc f 164.1 107.5   5 48.086 0.6551 44.353, 254.6 -1.1
CC063/Unc f 135.7 72.52   3 41.868 0.5345 81.65, 218.1 -1.59
CC071/TauUnc f 284.5 11.477   4 5.7387 0.0403 269.1, 296.8 1.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 223.7 37.2400766826 297.8700407098 149.5299592902
CC002/Unc f 239.28 37.2400766826 313.4500407098 165.1099592902
CC004/TauUnc f 256.922 37.2400766826 331.0920407098 182.7519592902
CC006/TauUnc f 213.8 41.6356714748 296.7246264605 130.8753735395
CC008/GeniUnc f 240.925 41.6356714748 323.8496264605 158.0003735395
CC011/Unc f 366.86 37.2400766826 441.0300407098 292.6899592902
CC012/GeniUnc f 198.35 41.6356714748 281.2746264605 115.4253735395
CC019/TauUnc f 205.48 37.2400766826 279.6500407098 131.3099592902
CC024/GeniUnc f 247.55 58.8817312782 364.8231313952 130.2768686048
CC027/GeniUnc f 338.34 37.2400766826 412.5100407098 264.1699592902
CC028/GeniUnc f 213.225 41.6356714748 296.1496264605 130.3003735395
CC030/GeniUnc f 165.52 37.2400766826 239.6900407098 91.3499592902
CC032/GeniUnc f 253.14 37.2400766826 327.3100407098 178.9699592902
CC035/Unc f 221.26 37.2400766826 295.4300407098 147.0899592902
CC036/Unc f 185.216 37.2400766826 259.3860407098 111.0459592902
CC037/TauUnc f 177.9 37.2400766826 252.0700407098 103.7299592902
CC040/TauUnc f 231.975 41.6356714748 314.8996264605 149.0503735395
CC041/TauUnc f 147.1564 37.2400766826 221.3264407098 72.9863592902
CC045/GeniUnc f 281.8 41.6356714748 364.7246264605 198.8753735395
CC059/TauUnc f 164.14 37.2400766826 238.3100407098 89.9699592902
CC063/Unc f 135.6833333333 48.0767322677 231.4364441522 39.9302225145
CC071/TauUnc f 284.525 41.6356714748 367.4496264605 201.6003735395




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA