Project measure / variable:   Bennett4   Y_fine_day_HP

ID, description, units MPD:114895   Y_fine_day_HP   activity on y-axis fine movement (beam breaks), day   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis fine movement (beam breaks), day HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means231.1   n
Median of the strain means224.9   n
SD of the strain means± 55.32
Coefficient of variation (CV)0.2394
Min–max range of strain means98.33   –   359.9   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 304274.4546 14489.2597 3.2919 < 0.0001
Residuals 78 343311.2371 4401.4261


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 224.3 36.816   5 16.465 0.1642 172.4, 263.6 -0.12
CC002/Unc f 225.5 22.069   5 9.8697 0.0979 192.0, 251.1 -0.1
CC004/TauUnc f 359.9 158.1   5 70.72 0.4394 214.1, 598.9 2.33
CC006/TauUnc f 254.7 40.48   4 20.24 0.1589 217.9, 295.4 0.43
CC008/GeniUnc f 303.8 54.94   4 27.469 0.1808 233.2, 361.1 1.31
CC011/Unc f 243.1 129.2   5 57.76 0.5313 29.176, 361.2 0.22
CC012/GeniUnc f 190.6 27.496   5 12.296 0.1442 159.0, 234.2 -0.73
CC019/TauUnc f 193.8 24.038   5 10.75 0.1241 161.4, 216.4 -0.67
CC024/GeniUnc f 200.4 75.87   2   53.65 0.3785 146.8, 254.1 -0.55
CC027/GeniUnc f 295.3 61.38   5 27.449 0.2079 216.6, 382.6 1.16
CC028/GeniUnc f 225.4 17.815   4 8.9075 0.079 202.6, 245.6 -0.1
CC030/GeniUnc f 98.33 74.41   5 33.278 0.7568 -2.4
CC032/GeniUnc f 284.3 47.812   5 21.382 0.1682 206.3, 336.9 0.96
CC035/Unc f 218.6 45.639   5 20.411 0.2088 171.7, 271.8 -0.23
CC036/Unc f 229.0 32.969   4 16.484 0.144 183.2, 258.9 -0.04
CC037/TauUnc f 203.4 56.85   5 25.422 0.2795 155.2, 294.9 -0.5
CC040/TauUnc f 193.2 44.148   5 19.743 0.2285 161.9, 268.5 -0.69
CC041/TauUnc f 180.9 32.176   5 14.39 0.1778 143.2, 232.2 -0.91
CC045/GeniUnc f 315.6 69.45   4 34.727 0.2201 241.6, 408.5 1.53
CC059/TauUnc f 225.9 35.996   5 16.098 0.1593 164.6, 254.4 -0.09
CC063/Unc f 206.9 25.072   3 14.475 0.1212 178.1, 223.6 -0.44
CC071/TauUnc f 211.3 99.3   5 44.41 0.4699 53.12, 317.5 -0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 224.28 29.6696009984 283.3476381805 165.2123618195
CC002/Unc f 225.48 29.6696009984 284.5476381805 166.4123618195
CC004/TauUnc f 359.88 29.6696009984 418.9476381805 300.8123618195
CC006/TauUnc f 254.675 33.1716223488 320.7146271209 188.6353728791
CC008/GeniUnc f 303.85 33.1716223488 369.8896271209 237.8103728791
CC011/Unc f 243.1152 29.6696009984 302.1828381805 184.0475618195
CC012/GeniUnc f 190.62 29.6696009984 249.6876381805 131.5523618195
CC019/TauUnc f 193.76 29.6696009984 252.8276381805 134.6923618195
CC024/GeniUnc f 200.45 46.9117582117 293.8441363285 107.0558636715
CC027/GeniUnc f 295.28 29.6696009984 354.3476381805 236.2123618195
CC028/GeniUnc f 225.375 33.1716223488 291.4146271209 159.3353728791
CC030/GeniUnc f 98.326 29.6696009984 157.3936381805 39.2583618195
CC032/GeniUnc f 284.28 29.6696009984 343.3476381805 225.2123618195
CC035/Unc f 218.6 29.6696009984 277.6676381805 159.5323618195
CC036/Unc f 229.0 33.1716223488 295.0396271209 162.9603728791
CC037/TauUnc f 203.4 29.6696009984 262.4676381805 144.3323618195
CC040/TauUnc f 193.22 29.6696009984 252.2876381805 134.1523618195
CC041/TauUnc f 180.92 29.6696009984 239.9876381805 121.8523618195
CC045/GeniUnc f 315.6 33.1716223488 381.6396271209 249.5603728791
CC059/TauUnc f 225.92 29.6696009984 284.9876381805 166.8523618195
CC063/Unc f 206.9333333333 38.3032901851 283.1893263242 130.6773403424
CC071/TauUnc f 211.324 29.6696009984 270.3916381805 152.2563618195




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA