Project measure / variable:   Bennett4   Y_amb_ave_HFHS

ID, description, units MPD:114894   Y_amb_ave_HFHS   activity on y-axis ambulatory movement (beam breaks), average for day and night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis ambulatory movement (beam breaks), average for day and night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means638.1   n
Median of the strain means607.8   n
SD of the strain means± 310.7
Coefficient of variation (CV)0.487
Min–max range of strain means360.1   –   1610.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 9031583.8805 430075.4229 2.3462 0.0037
Residuals 76 13931191.0437 183305.1453


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 373.2 104.1   5 46.577 0.2791 248.1, 522.8 -0.85
CC002/Unc f 520.1 172.3   5 77.05 0.3313 341.3, 799.1 -0.38
CC004/TauUnc f 1315.0 724.7   5 324.1 0.5511 733.8, 2569.0 2.18
CC006/TauUnc f 604.1 95.06   4 47.528 0.1574 478.6, 707.9 -0.11
CC008/GeniUnc f 479.7 115.9   4 57.94 0.2416 375.0, 590.4 -0.51
CC011/Unc f 720.8 402.0   5 179.8 0.5577 352.6, 1407.0 0.27
CC012/GeniUnc f 360.1 77.63   4 38.816 0.2156 301.1, 474.4 -0.89
CC019/TauUnc f 462.8 54.85   5 24.532 0.1185 367.8, 501.8 -0.56
CC024/GeniUnc f 678.4 9.5459   2   6.75 0.0141 671.6, 685.1 0.13
CC027/GeniUnc f 1013.0 185.9   5 83.13 0.1835 837.3, 1233.0 1.21
CC028/GeniUnc f 418.4 75.29   4 37.647 0.18 319.0, 486.1 -0.71
CC030/GeniUnc f 430.4 96.85   5 43.314 0.2251 367.6, 597.9 -0.67
CC032/GeniUnc f 611.5 102.2   5 45.696 0.1671 481.8, 732.9 -0.09
CC035/Unc f 460.0 119.6   5 53.5 0.26 333.9, 645.1 -0.57
CC036/Unc f 637.5 145.3   5 64.97 0.2279 467.9, 785.4 0.0
CC037/TauUnc f 613.3 186.8   5 83.56 0.3046 288.1, 766.7 -0.08
CC040/TauUnc f 613.8 162.9   4 81.47 0.2655 386.2, 746.2 -0.08
CC041/TauUnc f 360.7 168.4   5 75.33 0.467 178.7, 603.4 -0.89
CC045/GeniUnc f 1610.0 1832.0   4 916.2 1.1381 657.4, 4358.0 3.13
CC059/TauUnc f 407.7 142.1   5 63.55 0.3486 187.9, 525.6 -0.74
CC063/Unc f 672.8 106.3   3 61.38 0.158 573.4, 784.9 0.11
CC071/TauUnc f 674.1 114.8   4 57.42 0.1704 561.6, 775.8 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 373.16 191.470700271 754.5069492793 -8.1869492793
CC002/Unc f 520.1 191.470700271 901.4469492793 138.7530507207
CC004/TauUnc f 1315.1 191.470700271 1696.4469492793 933.7530507207
CC006/TauUnc f 604.075 214.0707507528 1030.4338508003 177.7161491997
CC008/GeniUnc f 479.725 214.0707507528 906.0838508003 53.3661491997
CC011/Unc f 720.78 191.470700271 1102.1269492793 339.4330507207
CC012/GeniUnc f 360.075 214.0707507528 786.4338508003 -66.2838508003
CC019/TauUnc f 462.8 191.470700271 844.1469492793 81.4530507207
CC024/GeniUnc f 678.35 302.7417590219 1281.3124692397 75.3875307603
CC027/GeniUnc f 1013.14 191.470700271 1394.4869492793 631.7930507207
CC028/GeniUnc f 418.4 214.0707507528 844.7588508003 -7.9588508003
CC030/GeniUnc f 430.36 191.470700271 811.7069492793 49.0130507207
CC032/GeniUnc f 611.54 191.470700271 992.8869492793 230.1930507207
CC035/Unc f 460.04 191.470700271 841.3869492793 78.6930507207
CC036/Unc f 637.46 191.470700271 1018.8069492793 256.1130507207
CC037/TauUnc f 613.34 191.470700271 994.6869492793 231.9930507207
CC040/TauUnc f 613.8 214.0707507528 1040.1588508003 187.4411491997
CC041/TauUnc f 360.7 191.470700271 742.0469492793 -20.6469492793
CC045/GeniUnc f 1609.95 214.0707507528 2036.3088508003 1183.5911491997
CC059/TauUnc f 407.7 191.470700271 789.0469492793 26.3530507207
CC063/Unc f 672.8333333333 247.1876111455 1165.1501278953 180.5165387714
CC071/TauUnc f 674.075 214.0707507528 1100.4338508003 247.7161491997




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA