Project measure / variable:   Bennett4   Y_amb_night_HP

ID, description, units MPD:114891   Y_amb_night_HP   activity on y-axis ambulatory movement (beam breaks), night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis ambulatory movement (beam breaks), night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means908.5   n
Median of the strain means730.9   n
SD of the strain means± 729.5
Coefficient of variation (CV)0.803
Min–max range of strain means383.0   –   3995.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 55468421.1679 2641353.3889 16.388 < 0.0001
Residuals 78 12571730.8273 161176.0362


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 677.5 132.7   5 59.34 0.1959 544.5, 854.5 -0.32
CC002/Unc f 499.6 121.5   5 54.33 0.2431 346.2, 647.0 -0.56
CC004/TauUnc f 3995.0 1531.0   5 684.5 0.3831 2471.0, 5753.0 4.23
CC006/TauUnc f 1308.0 121.2   4 60.59 0.0926 1140.0, 1427.0 0.55
CC008/GeniUnc f 813.3 265.5   4 132.8 0.3265 473.2, 1122.0 -0.13
CC011/Unc f 739.2 322.6   5 144.3 0.4365 400.5, 1247.0 -0.23
CC012/GeniUnc f 383.0 22.163   5 9.9117 0.0579 359.2, 412.1 -0.72
CC019/TauUnc f 759.3 113.4   5 50.72 0.1494 609.6, 891.4 -0.2
CC024/GeniUnc f 716.6 218.1   2   154.2 0.3043 562.4, 870.8 -0.26
CC027/GeniUnc f 1323.0 294.7   5 131.8 0.2228 1133.0, 1836.0 0.57
CC028/GeniUnc f 559.2 68.06   4 34.029 0.1217 499.9, 652.6 -0.48
CC030/GeniUnc f 441.7 293.8   5 131.4 0.6652 70.76, 800.4 -0.64
CC032/GeniUnc f 681.8 106.8   5 47.756 0.1566 544.9, 820.3 -0.31
CC035/Unc f 682.7 255.8   5 114.4 0.3746 406.7, 973.1 -0.31
CC036/Unc f 930.0 286.8   4 143.4 0.3084 530.7, 1147.0 0.03
CC037/TauUnc f 722.5 93.51   5 41.82 0.1294 606.9, 858.1 -0.25
CC040/TauUnc f 901.8 251.9   5 112.6 0.2793 604.4, 1257.0 -0.01
CC041/TauUnc f 573.8 244.2   5 109.2 0.4257 279.8, 868.3 -0.46
CC045/GeniUnc f 1016.0 277.9   4 139.0 0.2737 713.8, 1318.0 0.15
CC059/TauUnc f 599.7 132.4   5 59.23 0.2208 420.3, 754.4 -0.42
CC063/Unc f 920.6 149.7   3 86.43 0.1626 748.1, 1016.0 0.02
CC071/TauUnc f 742.2 201.7   5 90.22 0.2718 418.6, 940.9 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 677.48 179.5416588138 1034.919985179 320.040014821
CC002/Unc f 499.62 179.5416588138 857.059985179 142.180014821
CC004/TauUnc f 3995.2 179.5416588138 4352.639985179 3637.760014821
CC006/TauUnc f 1308.5 200.7336769504 1708.1300523684 908.8699476316
CC008/GeniUnc f 813.3 200.7336769504 1212.9300523684 413.6699476316
CC011/Unc f 739.18 179.5416588138 1096.619985179 381.740014821
CC012/GeniUnc f 383.04 179.5416588138 740.479985179 25.600014821
CC019/TauUnc f 759.32 179.5416588138 1116.759985179 401.880014821
CC024/GeniUnc f 716.6 283.8802883682 1281.7622399913 151.4377600087
CC027/GeniUnc f 1322.8 179.5416588138 1680.239985179 965.360014821
CC028/GeniUnc f 559.25 200.7336769504 958.8800523684 159.6199476316
CC030/GeniUnc f 441.672 179.5416588138 799.111985179 84.232014821
CC032/GeniUnc f 681.76 179.5416588138 1039.199985179 324.320014821
CC035/Unc f 682.74 179.5416588138 1040.179985179 325.300014821
CC036/Unc f 930.025 200.7336769504 1329.6550523684 530.3949476316
CC037/TauUnc f 722.48 179.5416588138 1079.919985179 365.040014821
CC040/TauUnc f 901.82 179.5416588138 1259.259985179 544.380014821
CC041/TauUnc f 573.76 179.5416588138 931.199985179 216.320014821
CC045/GeniUnc f 1015.525 200.7336769504 1415.1550523684 615.8949476316
CC059/TauUnc f 599.74 179.5416588138 957.179985179 242.300014821
CC063/Unc f 920.6333333333 231.7872848454 1382.0863699557 459.180296711
CC071/TauUnc f 742.22 179.5416588138 1099.659985179 384.780014821




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA