Project measure / variable:   Bennett4   Y_amb_day_HP

ID, description, units MPD:114889   Y_amb_day_HP   activity on y-axis ambulatory movement (beam breaks), day   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis ambulatory movement (beam breaks), day HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means341.5   n
Median of the strain means277.4   n
SD of the strain means± 172.3
Coefficient of variation (CV)0.5044
Min–max range of strain means141.6   –   888.1   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 2968947.5693 141378.4557 4.8031 < 0.0001
Residuals 78 2295927.09 29434.9627


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 258.9 85.99   5 38.457 0.3321 151.8, 364.9 -0.48
CC002/Unc f 318.2 66.77   5 29.862 0.2098 252.8, 409.9 -0.14
CC004/TauUnc f 888.1 565.7   5 253.0 0.6369 389.4, 1725.0 3.17
CC006/TauUnc f 420.4 122.2   4 61.08 0.2906 312.7, 571.8 0.46
CC008/GeniUnc f 461.5 115.4   4 57.7 0.2501 332.2, 599.1 0.7
CC011/Unc f 364.2 217.6   5 97.31 0.5974 54.12, 639.9 0.13
CC012/GeniUnc f 195.9 60.13   5 26.891 0.3069 118.0, 275.1 -0.85
CC019/TauUnc f 253.3 41.83   5 18.707 0.1651 205.1, 299.1 -0.51
CC024/GeniUnc f 226.9 80.61   2   57.0 0.3553 169.9, 283.9 -0.67
CC027/GeniUnc f 532.8 217.6   5 97.32 0.4084 348.1, 906.6 1.11
CC028/GeniUnc f 256.7 35.308   4 17.654 0.1376 204.4, 280.1 -0.49
CC030/GeniUnc f 141.6 120.9   5 54.05 0.8539 -1.16
CC032/GeniUnc f 527.2 154.6   5 69.16 0.2933 366.2, 765.9 1.08
CC035/Unc f 274.6 104.0   5 46.512 0.3788 171.9, 443.9 -0.39
CC036/Unc f 280.1 21.567   4 10.784 0.077 252.0, 303.0 -0.36
CC037/TauUnc f 243.3 96.13   5 42.989 0.3951 167.0, 404.9 -0.57
CC040/TauUnc f 255.4 86.52   5 38.694 0.3387 198.9, 407.1 -0.5
CC041/TauUnc f 181.5 62.27   5 27.846 0.3431 114.4, 282.4 -0.93
CC045/GeniUnc f 606.4 177.5   4 88.73 0.2927 434.4, 854.1 1.54
CC059/TauUnc f 244.3 71.82   5 32.118 0.294 154.8, 305.3 -0.56
CC063/Unc f 284.5 47.872   3 27.639 0.1683 250.4, 339.2 -0.33
CC071/TauUnc f 298.0 134.6   5 60.2 0.4518 125.5, 485.0 -0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 258.94 76.7267393962 411.6912042264 106.1887957735
CC002/Unc f 318.22 76.7267393962 470.9712042265 165.4687957735
CC004/TauUnc f 888.14 76.7267393962 1040.8912042265 735.3887957736
CC006/TauUnc f 420.35 85.7831024909 591.1310381476 249.5689618524
CC008/GeniUnc f 461.525 85.7831024909 632.3060381476 290.7439618524
CC011/Unc f 364.244 76.7267393962 516.9952042265 211.4927957735
CC012/GeniUnc f 195.9 76.7267393962 348.6512042265 43.1487957735
CC019/TauUnc f 253.3 76.7267393962 406.0512042265 100.5487957735
CC024/GeniUnc f 226.9 121.3156269651 468.4208603446 -14.6208603446
CC027/GeniUnc f 532.84 76.7267393962 685.5912042265 380.0887957735
CC028/GeniUnc f 256.675 85.7831024909 427.4560381476 85.8939618524
CC030/GeniUnc f 141.552 76.7267393962 294.3032042265 -11.1992042265
CC032/GeniUnc f 527.24 76.7267393962 679.9912042265 374.4887957735
CC035/Unc f 274.56 76.7267393962 427.3112042265 121.8087957735
CC036/Unc f 280.075 85.7831024909 450.8560381476 109.2939618524
CC037/TauUnc f 243.28 76.7267393962 396.0312042265 90.5287957735
CC040/TauUnc f 255.42 76.7267393962 408.1712042265 102.6687957735
CC041/TauUnc f 181.5 76.7267393962 334.2512042265 28.7487957735
CC045/GeniUnc f 606.35 85.7831024909 777.1310381476 435.5689618524
CC059/TauUnc f 244.32 76.7267393962 397.0712042265 91.5687957735
CC063/Unc f 284.4666666667 99.0537946301 481.6676233607 87.2657099726
CC071/TauUnc f 297.96 76.7267393962 450.7112042265 145.2087957735




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA